FFCP PHASE1:Hg19::chr22:35807395..35807398,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4174 | |EntrezGene=4174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6948 | |HGNC=6948 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000465557_5end | |||
|cluster_id=chr22:35807395..35807398,+ | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_13_at_MCM5_5end | |||
|id=chr22:35807395..35807398,+ | |||
|ontology_enrichment_celltype=CL:0000990!1.04e-29!8;CL:0000451!3.81e-24!10;CL:0000453!1.41e-18!5;CL:0000840!5.93e-15!5;CL:0001029!5.93e-15!5;CL:0000945!5.25e-10!24;CL:0000826!5.25e-10!24 | |||
|ontology_enrichment_celltype_v019=CL:0000453;6.64e-89;5!CL:0000990;5.60e-50;8!CL:0000451;4.07e-41;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,6.64e-89,5;CL:0000990,5.60e-50,8;CL:0000451,4.07e-41,10 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.35e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.59e-18!7;UBERON:0002106!6.48e-17!3;UBERON:0004854!6.48e-17!3;UBERON:0009034!6.48e-17!3;UBERON:0002095!6.48e-17!3;UBERON:0004782!6.48e-17!3;UBERON:0003281!6.48e-17!3;UBERON:0009664!6.48e-17!3;UBERON:0002296!6.48e-17!3;UBERON:0005602!6.48e-17!3;UBERON:0001179!6.48e-17!3;UBERON:0006293!6.48e-17!3;UBERON:0007023!3.01e-12!115;UBERON:0002298!9.12e-11!8;UBERON:0001042!2.61e-08!10;UBERON:0009145!2.61e-08!10;UBERON:0006331!4.72e-08!3;UBERON:0000988!5.07e-08!3;UBERON:0006562!1.45e-07!11;UBERON:0000029!6.43e-07!1;UBERON:0005057!9.22e-07!26;UBERON:0001154!9.48e-07!1;UBERON:0001153!9.48e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.12e-17;3!UBERON:0004177;3.60e-11;5!UBERON:0005057;3.60e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.12e-17,3;UBERON:0004854,1.12e-17,3;UBERON:0009034,1.12e-17,3;UBERON:0002095,1.12e-17,3;UBERON:0004782,1.12e-17,3;UBERON:0003281,1.12e-17,3;UBERON:0009664,1.12e-17,3;UBERON:0002296,1.12e-17,3;UBERON:0005602,1.12e-17,3;UBERON:0001179,1.12e-17,3;UBERON:0006293,1.12e-17,3;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7;UBERON:0000945,1.80e-07,8;UBERON:0010039,1.80e-07,8 | |||
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|short_description=p13@MCM5 | |||
}} | }} |
Latest revision as of 00:05, 20 September 2015
Short description: | p13@MCM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MCM5_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -33bp_to_ENST00000465557_5end |
EntrezGene: | MCM5 |
HGNC: | 6948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 6.64e-89 | 5 |
conventional dendritic cell | 5.60e-50 | 8 |
dendritic cell | 4.07e-41 | 10 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.12e-17 | 3 |
gastrointestinal system mesentery | 1.12e-17 | 3 |
stomach region | 1.12e-17 | 3 |
mesentery | 1.12e-17 | 3 |
gastrointestinal system serosa | 1.12e-17 | 3 |
mesentery of stomach | 1.12e-17 | 3 |
gut mesentery | 1.12e-17 | 3 |
dorsal mesentery | 1.12e-17 | 3 |
dorsal mesogastrium | 1.12e-17 | 3 |
peritoneal cavity | 1.12e-17 | 3 |
spleen primordium | 1.12e-17 | 3 |
hemopoietic organ | 2.35e-08 | 7 |
immune organ | 2.35e-08 | 7 |
stomach | 1.80e-07 | 8 |
food storage organ | 1.80e-07 | 8 |