FFCP PHASE1:Hg19::chr18:56246745..56246774,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:56246745..56246774,- to FFCP PHASE1:Hg19::chr18:56246745..56246774,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=-178bp_to_AL832018_5end | |||
|cluster_id=chr18:56246745..56246774,- | |||
|coexpression_cluster_id=C2467 | |||
|description=CAGE_peak_11_at_ALPK2_5end | |||
|id=chr18:56246745..56246774,- | |||
|ontology_enrichment_celltype=CL:0000055!7.64e-18!180;CL:0000057!1.04e-16!75;CL:0002620!5.68e-12!23;CL:0000499!1.52e-08!27;CL:0000128!5.89e-07!7;CL:0000126!5.89e-07!7;CL:0000127!5.89e-07!7;CL:0002453!5.89e-07!7;CL:0002334!7.66e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.76e-19;23!CL:0000243;1.81e-10;15!CL:0000125;1.81e-10;15!CL:0000128;8.53e-10;7!CL:0000126;8.53e-10;7!CL:0000127;8.53e-10;7!CL:0000095;3.84e-09;17!CL:0002580;2.53e-07;3!CL:0000135;5.94e-07;3!CL:0000388;5.94e-07;3!CL:0000197;9.19e-07;6!CL:0000098;9.19e-07;6!CL:0002167;9.19e-07;6!CL:0002603;9.89e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.23e-19,23;CL:0000057,3.99e-16,76;CL:0000243,1.32e-10,15;CL:0000125,1.32e-10,15;CL:0000030,1.32e-10,15;CL:0000339,1.32e-10,15;CL:0000128,7.71e-10,7;CL:0000126,7.71e-10,7;CL:0000127,7.71e-10,7;CL:0002453,7.71e-10,7;CL:0000095,2.90e-09,17;CL:0000123,2.90e-09,17;CL:0000219,7.73e-08,386;CL:0002580,3.79e-07,3;CL:0000135,4.59e-07,3;CL:0000388,4.59e-07,3;CL:0000197,9.59e-07,6;CL:0000098,9.59e-07,6;CL:0002167,9.59e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000339;1.81e-10;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.15e-08;5!DOID:450;6.15e-08;5!DOID:66;6.15e-08;5!DOID:423;6.15e-08;5!DOID:0080000;6.15e-08;5!DOID:11722;6.15e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.25e-08,5;DOID:450,6.25e-08,5;DOID:66,6.25e-08,5;DOID:423,6.25e-08,5;DOID:0080000,6.25e-08,5;DOID:11722,6.25e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.66e-09!9;UBERON:0002097!1.25e-08!40;UBERON:0002199!2.97e-08!45;UBERON:0002416!2.97e-08!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.81e-14;9!UBERON:0001557;8.81e-14;9!UBERON:0002097;4.58e-09;41!UBERON:0002199;3.99e-07;46!UBERON:0002416;3.99e-07;46!UBERON:0007846;5.94e-07;3!UBERON:0000043;5.94e-07;3!UBERON:0007845;5.94e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.73e-14,9;UBERON:0002097,6.45e-12,41;UBERON:0002199,3.98e-10,46;UBERON:0002416,3.98e-10,46;UBERON:0007846,4.59e-07,3;UBERON:0000043,4.59e-07,3;UBERON:0007845,4.59e-07,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0.487932798790507,1.23121058076788,2.04000691244253,1.56727360739044,1.14494394852423,1.50561867580173,1.88313959392204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.44575660953827,4.51204119572301,0.869079113764942,0.795285947051099,0,0,0.665188192387692,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96366342034382,0,2.91300197789081,0,0,0,0,0.49333509683432,0.311211035399766,0,0,0.908144565869588,0,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0.408308342509787,0,0.206651562351531,1.18800285728205,1.48360157567134,0,0,0,0,0.554128230968366,0,2.75839016219118,1.05166641234618,0,3.58779271377724,8.11518077510556,4.4505699243508,0.300091096084402,2.57631323096097,8.24449728146013,4.65292140828975,2.02531598689519,2.92311015483596,3.78650661366172,7.91629128323774,1.77810662500693,4.61512470271599,1.61203357164224,1.3564847384839,0,0,0,0,0,0,0,0,0,3.12899064659632,7.07565032012174,0,0.464367928031979,0,3.19428360107579,1.18009283054671,2.6511213287183,1.54411561825352,2.61455332910887,2.13543557199987,1.75280700608214,1.56977172100277,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0.336393253036082,0.43596006883328,1.10007428731425,4.78305348303778,0,0,2.12750493267896,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.55287225434007,4.59447743336456,0,0.579125226670317,0.205476322550383,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07970861530807,6.0665856191035,5.99269177128952,7.9656162195045,0,0,0,3.32112799267718,1.10621501125022,1.30325421702124,0,0.343143423810856,0,0,0,0,0,0,2.23297027036899,5.37116906508219,1.12264037773229,1.02511319404561,7.16390148693385,0.965123526861645,0,0.462629081407967,0.177561725313127,0.574890092096664,0,0.697262270759755,0,0,0,1.49258782613989,0.910455840033585,0.786746489756545,0,0.0770153371044148,0.784349769176855,0,0.527758144464379,0,0,0.215915916102139,0,0,1.00337954770971,0,0,0.447749509444357,0,0,0,0,0,0,0.183138929636687,0,0,0,4.82051789532479,0.580024309752732,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.255679882248303,0.979352392114111,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0,0.744316738719335,4.74569137078089,1.5250415513906,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.818999468447914,0.565621727814851,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,1.89996871767898,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83031449570902,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0.933118762985422,0.539210106883961,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.32681539055697,0,0,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,1.26598838716816,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.64127056201227,0,0.39961921916426,0,0,0,0,0,0,5.70797665509179,5.96236223980299,1.93796613509011,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0.201550417460179,1.08089965062721,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,1.1248694577575,0,0,0,0.0788057072991982,0,0.105600336519406,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,2.21504428321048,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.934853239388898,0,0.757612021100357,1.25783950876288,0,0,0,0.310874401165561,0,0.318593534327405,0,0,0.414706207840855,0.53168342911599,0,0,0.380805212168795,0.406870733204662,0.545545977607678,0.107410557042488,0,1.19428766609585,3.20022211730523,3.77735275701072,3.03074539889327,0,0,2.35885750512418,0.260994291965212,0.906823702049089,0.231522474323834,0.244736704506468,0.895444205407437,0,1.31570429747224,0.530067437837643,0.578742114812744,0.337884881306145,0.76872455576384,0.345430341731199,0,0,1.16916185303633,2.39156712564054,1.4720885483026,0.655219697692825,0,0,0,0,0,2.83757976783418,0,0,0,0,0,0,0.109209638192014,0,0,0,0.558644917973244,2.54403480522735,0,0,0.705351887381368,3.6749457282384,0,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,0,0,0,1.41193548092464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,1.74362138052188,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0.955538938977433,0,0,0,1.29485767437579,1.43727929598746,3.4794432940146,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,4.15958065768276,1.73050624849516,0,0,0.760191006068622,0,0,0,0,0,0,0,0,0.426467963801962,0.714193294391221,0.0645889098360061,0,0.560659312903067,0,0.202117188958219,0,0,0,0,0.665320713092027,0,0,1.9307228228694,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0.487932798790507,1.23121058076788,2.04000691244253,1.56727360739044,1.14494394852423,1.50561867580173,1.88313959392204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.44575660953827,4.51204119572301,0.869079113764942,0.795285947051099,0,0,0.665188192387692,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96366342034382,0,2.91300197789081,0,0,0,0,0.49333509683432,0.311211035399766,0,0,0.908144565869588,0,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0.408308342509787,0,0.206651562351531,1.18800285728205,1.48360157567134,0,0,0,0,0.554128230968366,0,2.75839016219118,1.05166641234618,0,3.58779271377724,8.11518077510556,4.4505699243508,0.300091096084402,2.57631323096097,8.24449728146013,4.65292140828975,2.02531598689519,2.92311015483596,3.78650661366172,7.91629128323774,1.77810662500693,4.61512470271599,1.61203357164224,1.3564847384839,0,0,0,0,0,0,0,0,0,3.12899064659632,7.07565032012174,0,0.464367928031979,0,3.19428360107579,1.18009283054671,2.6511213287183,1.54411561825352,2.61455332910887,2.13543557199987,1.75280700608214,1.56977172100277,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0.336393253036082,0.43596006883328,1.10007428731425,4.78305348303778,0,0,2.12750493267896,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.55287225434007,4.59447743336456,0,0.579125226670317,0.205476322550383,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07970861530807,6.0665856191035,5.99269177128952,7.9656162195045,0,0,0,3.32112799267718,1.10621501125022,1.30325421702124,0,0.343143423810856,0,0,0,0,0,0,2.23297027036899,5.37116906508219,1.12264037773229,1.02511319404561,7.16390148693385,0.965123526861645,0,0.462629081407967,0.177561725313127,0.574890092096664,0,0.697262270759755,0,0,0,1.49258782613989,0.910455840033585,0.786746489756545,0,0.0770153371044148,0.784349769176855,0,0.527758144464379,0,0,0.215915916102139,0,0,1.00337954770971,0,0,0.447749509444357,0,0,0,0,0,0,0.183138929636687,0,0,0,4.82051789532479,0.580024309752732,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.255679882248303,0.979352392114111,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0,0.744316738719335,4.74569137078089,1.5250415513906,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.818999468447914,0.565621727814851,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,1.89996871767898,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83031449570902,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0.933118762985422,0.539210106883961,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.32681539055697,0,0,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,1.26598838716816,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.64127056201227,0,0.39961921916426,0,0,0,0,0,0,5.70797665509179,5.96236223980299,1.93796613509011,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0.201550417460179,1.08089965062721,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,1.1248694577575,0,0,0,0.0788057072991982,0,0.105600336519406,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,2.21504428321048,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.934853239388898,0,0.757612021100357,1.25783950876288,0,0,0,0.310874401165561,0,0.318593534327405,0,0,0.414706207840855,0.53168342911599,0,0,0.380805212168795,0.406870733204662,0.545545977607678,0.107410557042488,0,1.19428766609585,3.20022211730523,3.77735275701072,3.03074539889327,0,0,2.35885750512418,0.260994291965212,0.906823702049089,0.231522474323834,0.244736704506468,0.895444205407437,0,1.31570429747224,0.530067437837643,0.578742114812744,0.337884881306145,0.76872455576384,0.345430341731199,0,0,1.16916185303633,2.39156712564054,1.4720885483026,0.655219697692825,0,0,0,0,0,2.83757976783418,0,0,0,0,0,0,0.109209638192014,0,0,0,0.558644917973244,2.54403480522735,0,0,0.705351887381368,3.6749457282384,0,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,0,0,0,1.41193548092464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,1.74362138052188,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0.955538938977433,0,0,0,1.29485767437579,1.43727929598746,3.4794432940146,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,4.15958065768276,1.73050624849516,0,0,0.760191006068622,0,0,0,0,0,0,0,0,0.426467963801962,0.714193294391221,0.0645889098360061,0,0.560659312903067,0,0.202117188958219,0,0,0,0,0.665320713092027,0,0,1.9307228228694,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p11@ALPK2 | |||
}} | }} |
Latest revision as of 00:06, 20 September 2015
Short description: | p11@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ALPK2_5end |
Coexpression cluster: | C2467_Olfactory_Fibroblast_Hair_alveolar_glioblastoma_Preadipocyte_Ewing |
Association with transcript: | -178bp_to_AL832018_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.23e-19 | 23 |
fibroblast | 3.99e-16 | 76 |
glial cell (sensu Vertebrata) | 1.32e-10 | 15 |
glial cell | 1.32e-10 | 15 |
glioblast | 1.32e-10 | 15 |
glioblast (sensu Vertebrata) | 1.32e-10 | 15 |
oligodendrocyte | 7.71e-10 | 7 |
macroglial cell | 7.71e-10 | 7 |
astrocyte | 7.71e-10 | 7 |
oligodendrocyte precursor cell | 7.71e-10 | 7 |
neuron associated cell | 2.90e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.90e-09 | 17 |
motile cell | 7.73e-08 | 386 |
preadipocyte of the breast | 3.79e-07 | 3 |
fibrocyte | 4.59e-07 | 3 |
tendon cell | 4.59e-07 | 3 |
receptor cell | 9.59e-07 | 6 |
sensory epithelial cell | 9.59e-07 | 6 |
olfactory epithelial cell | 9.59e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.73e-14 | 9 |
skin of body | 6.45e-12 | 41 |
integument | 3.98e-10 | 46 |
integumental system | 3.98e-10 | 46 |
dense regular connective tissue | 4.59e-07 | 3 |
tendon | 4.59e-07 | 3 |
regular connective tissue | 4.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.25e-08 | 5 |
myotonic disease | 6.25e-08 | 5 |
muscle tissue disease | 6.25e-08 | 5 |
myopathy | 6.25e-08 | 5 |
muscular disease | 6.25e-08 | 5 |
myotonic dystrophy | 6.25e-08 | 5 |