FFCP PHASE1:Hg19::chr18:56247409..56247424,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_AK125243_5end | |association_with_transcript=-8bp_to_AK125243_5end | ||
|cluster_id=chr18:56247409..56247424,- | |||
|coexpression_cluster_id=C2468 | |||
|description=CAGE_peak_13_at_ALPK2_5end | |description=CAGE_peak_13_at_ALPK2_5end | ||
|id=chr18:56247409..56247424,- | |id=chr18:56247409..56247424,- | ||
|ontology_enrichment_celltype=CL:0002057!1.92e-13!42;CL:0000860!5.62e-12!45;CL:0002620!6.37e-10!23;CL:0000128!6.37e-09!7;CL:0000126!6.37e-09!7;CL:0000127!6.37e-09!7;CL:0002453!6.37e-09!7;CL:0000243!1.01e-08!15;CL:0000125!1.01e-08!15;CL:0000030!1.01e-08!15;CL:0000339!1.01e-08!15;CL:0000055!7.31e-08!180;CL:0000095!1.96e-07!17;CL:0000123!1.96e-07!17;CL:0000057!2.42e-07!75;CL:0002009!5.83e-07!65;CL:0002194!8.71e-07!63;CL:0000576!8.71e-07!63;CL:0000040!8.71e-07!63;CL:0000559!8.71e-07!63 | |ontology_enrichment_celltype=CL:0002057!1.92e-13!42;CL:0000860!5.62e-12!45;CL:0002620!6.37e-10!23;CL:0000128!6.37e-09!7;CL:0000126!6.37e-09!7;CL:0000127!6.37e-09!7;CL:0002453!6.37e-09!7;CL:0000243!1.01e-08!15;CL:0000125!1.01e-08!15;CL:0000030!1.01e-08!15;CL:0000339!1.01e-08!15;CL:0000055!7.31e-08!180;CL:0000095!1.96e-07!17;CL:0000123!1.96e-07!17;CL:0000057!2.42e-07!75;CL:0002009!5.83e-07!65;CL:0002194!8.71e-07!63;CL:0000576!8.71e-07!63;CL:0000040!8.71e-07!63;CL:0000559!8.71e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.56e-29;33!CL:0002057;2.56e-29;33!CL:0000473;1.66e-18;39!CL:0000234;1.66e-18;39!CL:0000576;1.14e-13;48!CL:0000128;6.78e-12;7!CL:0000126;6.78e-12;7!CL:0000127;6.78e-12;7!CL:0002605;1.85e-11;3!CL:0000243;2.44e-11;15!CL:0000125;2.44e-11;15!CL:0000095;5.36e-10;17!CL:0000197;1.70e-08;6!CL:0000098;1.70e-08;6!CL:0002167;1.70e-08;6!CL:0000453;3.57e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.01e-23,42;CL:0002057,2.01e-23,42;CL:0000473,7.06e-20,48;CL:0000234,7.06e-20,48;CL:0002194,6.21e-15,59;CL:0000576,6.21e-15,59;CL:0000040,6.21e-15,59;CL:0000559,6.21e-15,59;CL:0002009,2.68e-14,61;CL:0000839,7.03e-13,66;CL:0000557,1.27e-12,67;CL:0000128,7.29e-12,7;CL:0000126,7.29e-12,7;CL:0000127,7.29e-12,7;CL:0002453,7.29e-12,7;CL:0002605,1.80e-11,3;CL:0000766,1.94e-11,72;CL:0000243,2.13e-11,15;CL:0000125,2.13e-11,15;CL:0000030,2.13e-11,15;CL:0000339,2.13e-11,15;CL:0000095,4.76e-10,17;CL:0000123,4.76e-10,17;CL:0000763,3.55e-09,108;CL:0000049,3.55e-09,108;CL:0000197,1.79e-08,6;CL:0000098,1.79e-08,6;CL:0002167,1.79e-08,6;CL:0000453,3.58e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.00e-17;42!CL:0000339;2.44e-11;15 | |||
|ontology_enrichment_disease=DOID:17!5.75e-07!5;DOID:450!5.75e-07!5;DOID:66!5.75e-07!5;DOID:423!5.75e-07!5;DOID:0080000!5.75e-07!5;DOID:11722!5.75e-07!5 | |ontology_enrichment_disease=DOID:17!5.75e-07!5;DOID:450!5.75e-07!5;DOID:66!5.75e-07!5;DOID:423!5.75e-07!5;DOID:0080000!5.75e-07!5;DOID:11722!5.75e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.77e-10;5!DOID:450;1.77e-10;5!DOID:66;1.77e-10;5!DOID:423;1.77e-10;5!DOID:0080000;1.77e-10;5!DOID:11722;1.77e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.05e-10,5;DOID:450,2.05e-10,5;DOID:66,2.05e-10,5;DOID:423,2.05e-10,5;DOID:0080000,2.05e-10,5;DOID:11722,2.05e-10,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.04e-10,82;UBERON:0002371,1.31e-10,76;UBERON:0004765,2.36e-09,90;UBERON:0001434,5.71e-08,100;UBERON:0002405,6.86e-08,93;UBERON:0002390,2.82e-07,98;UBERON:0003061,2.82e-07,98 | |||
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| ||
|short_description=p13@ALPK2 | |short_description=p13@ALPK2 | ||
}} | }} |
Latest revision as of 00:10, 20 September 2015
Short description: | p13@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ALPK2_5end |
Coexpression cluster: | C2468_clear_migratory_mesothelioma_Astrocyte_glioblastoma_alveolar_renal |
Association with transcript: | -8bp_to_AK125243_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.01e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.01e-23 | 42 |
defensive cell | 7.06e-20 | 48 |
phagocyte | 7.06e-20 | 48 |
monopoietic cell | 6.21e-15 | 59 |
monocyte | 6.21e-15 | 59 |
monoblast | 6.21e-15 | 59 |
promonocyte | 6.21e-15 | 59 |
macrophage dendritic cell progenitor | 2.68e-14 | 61 |
myeloid lineage restricted progenitor cell | 7.03e-13 | 66 |
granulocyte monocyte progenitor cell | 1.27e-12 | 67 |
oligodendrocyte | 7.29e-12 | 7 |
macroglial cell | 7.29e-12 | 7 |
astrocyte | 7.29e-12 | 7 |
oligodendrocyte precursor cell | 7.29e-12 | 7 |
astrocyte of the cerebral cortex | 1.80e-11 | 3 |
myeloid leukocyte | 1.94e-11 | 72 |
glial cell (sensu Vertebrata) | 2.13e-11 | 15 |
glial cell | 2.13e-11 | 15 |
glioblast | 2.13e-11 | 15 |
glioblast (sensu Vertebrata) | 2.13e-11 | 15 |
neuron associated cell | 4.76e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 4.76e-10 | 17 |
myeloid cell | 3.55e-09 | 108 |
common myeloid progenitor | 3.55e-09 | 108 |
receptor cell | 1.79e-08 | 6 |
sensory epithelial cell | 1.79e-08 | 6 |
olfactory epithelial cell | 1.79e-08 | 6 |
Langerhans cell | 3.58e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.04e-10 | 82 |
bone marrow | 1.31e-10 | 76 |
skeletal element | 2.36e-09 | 90 |
skeletal system | 5.71e-08 | 100 |
immune system | 6.86e-08 | 93 |
hematopoietic system | 2.82e-07 | 98 |
blood island | 2.82e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.05e-10 | 5 |
myotonic disease | 2.05e-10 | 5 |
muscle tissue disease | 2.05e-10 | 5 |
myopathy | 2.05e-10 | 5 |
muscular disease | 2.05e-10 | 5 |
myotonic dystrophy | 2.05e-10 | 5 |