FFCP PHASE1:Hg19::chr9:110252035..110252057,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9314 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6348 | |||
|TSSclassifier=strong | |||
|UniProt=B7ZBT1,O43474 | |||
|association_with_transcript=0bp_to_ENST00000439281,NM_004235,uc004bdg.2,uc004bdh.2_5end | |||
|cluster_id=chr9:110252035..110252057,- | |||
|description=CAGE_peak_1_at_KLF4_5end | |||
|id=chr9:110252035..110252057,- | |||
|ontology_enrichment_celltype=CL:0002057!7.03e-26!42;CL:0000860!4.93e-25!45;CL:0000557!6.16e-20!71;CL:0002009!8.77e-20!65;CL:0000766!1.60e-19!76;CL:0002194!1.09e-18!63;CL:0000576!1.09e-18!63;CL:0000040!1.09e-18!63;CL:0000559!1.09e-18!63;CL:0000839!1.77e-16!70;CL:0002393!4.18e-07!9;CL:0002397!4.18e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-18;33!CL:0002057;1.83e-18;33!CL:0000576;1.86e-14;48!CL:0000473;1.23e-12;39!CL:0000234;1.23e-12;39!CL:0000766;5.96e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.30e-26,42;CL:0002057,6.30e-26,42;CL:0000473,7.82e-22,48;CL:0000234,7.82e-22,48;CL:0000557,9.24e-21,67;CL:0002009,1.45e-20,61;CL:0000766,2.92e-20,72;CL:0002194,1.91e-19,59;CL:0000576,1.91e-19,59;CL:0000040,1.91e-19,59;CL:0000559,1.91e-19,59;CL:0000839,3.72e-17,66;CL:0002393,4.08e-07,9;CL:0002397,4.08e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.88e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.59e-18!86;UBERON:0002371!1.49e-17!80;UBERON:0004765!1.76e-17!101;UBERON:0001434!1.76e-17!101;UBERON:0002390!1.12e-16!102;UBERON:0003061!1.12e-16!102;UBERON:0000062!1.60e-16!511;UBERON:0002193!3.98e-15!112;UBERON:0000926!2.46e-12!448;UBERON:0004120!2.46e-12!448;UBERON:0006603!2.46e-12!448;UBERON:0000468!2.21e-10!659;UBERON:0002405!2.42e-10!115;UBERON:0000467!2.99e-09!625;UBERON:0000480!5.86e-09!626;UBERON:0002204!4.33e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.17e-19,82;UBERON:0002371,3.55e-18,76;UBERON:0002390,3.37e-17,98;UBERON:0003061,3.37e-17,98;UBERON:0001434,3.89e-17,100;UBERON:0004765,4.76e-17,90;UBERON:0002193,1.53e-15,108;UBERON:0002405,1.96e-14,93;UBERON:0002204,4.88e-07,167 | |||
|phase1_expression=18.7128730648673,16.6998408634967,24.244157504507,9.00659685178174,9.38618298297304,18.3191090061077,22.796989035148,11.370957721683,13.0592814099919,5.89761447603621,11.1648186875588,84.0999282701163,74.9098218168808,26.3622331804899,32.4769428213357,4.70627602516243,2.41077811209591,1.46062018077475,1.46379839637152,0.61560529038394,0.612002073732759,3.13454721478088,0,0,0.502170558379211,0.0764134057479513,0.0821005894499457,0,1109.68062499076,423.747655499323,939.114604035317,14.7107395916628,12.6506485886865,23.2945026405076,0,0,37.8744566741953,443.750322234034,492.537162986668,613.272720642997,12.3153510831958,9.71680998056939,15.196958490417,98.2892094149857,104.6716364018,181.210293707299,189.429665078133,189.548396378062,329.217872261495,340.915484901748,368.871417401905,359.925953890427,403.69719214258,338.233974197925,502.432265265008,153.793991406308,105.068867772271,160.227844409345,242.112358865384,193.520203326884,366.97951020865,244.419813438357,291.416403785204,307.308045134073,165.129056779664,177.024190103636,304.560079758836,447.725121487517,380.161047528327,428.29640175849,182.830649795277,275.471671718698,354.437873933791,254.773875292202,358.025641141133,326.019193765525,250.268190194391,328.286687751533,226.944528416277,435.784485180369,315.282933360558,313.999680321406,0,1.63841583378639,1.77901850772711,15.3622880123943,8.80871171479227,4.59801951963587,7.27149360063348,2.86216126360609,178.163659331257,68.1195139670289,95.9505802594324,60.7988111463519,62.776959053932,34.5033151055351,21.0479454021801,16.1134412727158,15.8313154229622,0,0.977766799900771,1.4203434172042,0,0.445641827540694,2.3568472597987,1.77227115666897,1.35401931882508,0.25618263945135,0.260118695119756,0,0.276350017785848,0.289803085735052,0.889719378972363,1.33770414044857,0,0,6.51474839123266,9.27794102803101,5.81945291644857,1.59282707162048,0,0,13.1000353597662,4.22355816809581,6.24653632761729,10.1814218378927,3.28451198768419,5.64498881029251,4.54648332831962,8.54463982908514,14.6284119788377,2.68280343881454,8.69465420536006,28.5536930383807,22.0588680679791,42.1503370175997,15.1104329939709,90.0274510059876,0.945348171640679,0.443458794925128,2.89854792787316,49.7065591513819,52.0942262258335,62.6625708305686,37.3229502702886,37.4378935193425,29.1177933536315,131.646824616549,106.963048315884,124.438262945404,1.78886166630035,1.72046919021225,1.04142150482278,0.56530794192401,2.51699661725944,1.37559020970034,0.626984899610432,2.84258435086262,3.91342888955381,1.33888245105868,2.81980521976403,0.760272105718513,1.22031028774085,0.735326160691737,0,0.625098097988558,0.898117490504679,0.563057402416611,1.53316637465883,0.949265659568129,1.46561395144326,26.3560834872127,27.1446184903828,27.9100193371222,86.4731195949854,8.1043527465331,25.8197902585777,82.3221101549095,30.8561492512571,21.3057488054077,4.2699598291882,6.166688710429,10.5811752035921,13.2016458628294,2.94231425604226,4.69208025699287,8.64263886719998,91.6196798470145,31.8403278366927,11.9799082524334,35.5687859713287,26.5401966934909,15.0541838262362,9.69110566245515,21.027879639254,27.1463841259007,82.3506475970851,30.8880742893334,24.4794259985771,20.0235499626366,40.9612340835256,23.5670559535693,22.6464520968255,13.576141658725,20.1929705605185,17.4698043605441,33.6533251950777,11.4566504991621,14.5305604907978,10.8914268297469,11.6562545637759,16.8051013807265,11.1296731577514,60.8031674507685,12.0975956615533,19.0717255432631,9.06164147999147,31.5542217805143,21.6317261809403,55.9295356593089,35.5009592516614,4.93685281315437,5.59549954624609,21.4519547011259,12.2735754265876,7.7437240755031,13.6610550865147,18.6866973333294,11.3870064012128,10.8844107766139,16.9054970086671,3.6497735907583,0,2.57296375277154,2.76269842704961,31.1126511781426,27.4314203034443,13.2503616044625,14.1611139665605,12.7735845838245,15.6617441279999,15.6873199746532,14.2362371466658,11.9999864262546,8.43752300038988,9.61867892365976,0.738155454624648,8.41450642820675,4.9388881359768,2.94017422771084,7.60530208930985,17.6908899001973,50.2171420679193,0,7.99424850530238,2.91665277507493,24.5840639315321,66.3170344219955,21.9153159857355,27.7765335475589,57.6680700399275,16.6389565644733,0,0.579652024875384,3.40485213283883,11.5493158208859,17.1304639653346,8.18092854608773,102.726571734706,110.744714910239,13.2957183287195,2.10603838625314,11.8904929830983,11.2480600784132,6.71928512795438,8.79005602902796,54.1829062352232,23.8319829581449,44.0890081039993,0,0,337.944828331458,227.997766305633,340.728327817799,0.825472625798197,7.63976851116555,0,11.9750712215894,5.96399457679276,0,1.71495859578347,15.8104828926959,1.74384027533312,17.8212034544909,8.91974838728667,32.1890801266694,5.917119267892,4.25500986535793,7.28052058379563,0.514414748524284,1.41849132023278,1.8649552531127,20.7318090804314,18.9917561887005,2.46972101034231,9.44634934451832,27.0097881044335,4.75171123760058,8.741741934728,4.35766729300147,6.29829844446959,21.8922805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| |||
|short_description=p1@KLF4 | |||
}} |
Latest revision as of 01:05, 20 September 2015
Short description: | p1@KLF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000439281, NM_004235, uc004bdg.2, uc004bdh.2_5end |
EntrezGene: | KLF4 |
HGNC: | 6348 |
UniProt: | B7ZBT1O43474 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.30e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.30e-26 | 42 |
defensive cell | 7.82e-22 | 48 |
phagocyte | 7.82e-22 | 48 |
granulocyte monocyte progenitor cell | 9.24e-21 | 67 |
macrophage dendritic cell progenitor | 1.45e-20 | 61 |
myeloid leukocyte | 2.92e-20 | 72 |
monopoietic cell | 1.91e-19 | 59 |
monocyte | 1.91e-19 | 59 |
monoblast | 1.91e-19 | 59 |
promonocyte | 1.91e-19 | 59 |
myeloid lineage restricted progenitor cell | 3.72e-17 | 66 |
intermediate monocyte | 4.08e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.08e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone element | 9.17e-19 | 82 |
bone marrow | 3.55e-18 | 76 |
hematopoietic system | 3.37e-17 | 98 |
blood island | 3.37e-17 | 98 |
skeletal system | 3.89e-17 | 100 |
skeletal element | 4.76e-17 | 90 |
hemolymphoid system | 1.53e-15 | 108 |
immune system | 1.96e-14 | 93 |
musculoskeletal system | 4.88e-07 | 167 |