FFCP PHASE1:Hg19::chr12:6804456..6804460,-: Difference between revisions
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|id=chr12:6804456..6804460,-
|short_description=p13@C12orf53
|description=CAGE_peak_13_at_C12orf53_5end
|association_with_transcript=-447bp_to_AL831874_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=196500 | |EntrezGene=196500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25338 | |HGNC=25338 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-447bp_to_AL831874_5end | |||
|cluster_id=chr12:6804456..6804460,- | |||
|coexpression_cluster_id=C1173 | |||
|description=CAGE_peak_13_at_C12orf53_5end | |||
|id=chr12:6804456..6804460,- | |||
|ontology_enrichment_celltype=CL:0002319!5.20e-09!25;CL:0000133!6.61e-08!59;CL:0000095!1.05e-07!17;CL:0000123!1.05e-07!17;CL:0000243!3.38e-07!15;CL:0000125!3.38e-07!15;CL:0000030!3.38e-07!15;CL:0000339!3.38e-07!15;CL:0000333!6.36e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.13e-08;6!CL:0000404;6.13e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.92e-08,6;CL:0000031,5.92e-08,6;CL:0000404,5.92e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.96e-14;3!CL:0000031;6.13e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.96e-14;3!DOID:127;1.96e-14;3!DOID:0060072;3.60e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.09e-14,3;DOID:127,2.09e-14,3;DOID:0060072,3.79e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.51e-30!94;UBERON:0001016!6.51e-30!94;UBERON:0005743!1.42e-27!86;UBERON:0002780!2.93e-27!41;UBERON:0001890!2.93e-27!41;UBERON:0006240!2.93e-27!41;UBERON:0001893!1.09e-26!34;UBERON:0001869!1.59e-26!32;UBERON:0003080!2.00e-26!42;UBERON:0001017!2.84e-26!82;UBERON:0000955!9.75e-26!69;UBERON:0006238!9.75e-26!69;UBERON:0002791!3.88e-25!33;UBERON:0001049!2.06e-24!57;UBERON:0005068!2.06e-24!57;UBERON:0006241!2.06e-24!57;UBERON:0007135!2.06e-24!57;UBERON:0002020!2.63e-24!34;UBERON:0003528!2.63e-24!34;UBERON:0003056!2.29e-23!61;UBERON:0002616!2.81e-23!59;UBERON:0002346!1.06e-21!90;UBERON:0003075!1.28e-21!86;UBERON:0007284!1.28e-21!86;UBERON:0000956!3.66e-21!25;UBERON:0000203!3.66e-21!25;UBERON:0000033!1.95e-17!123;UBERON:0002619!8.99e-17!22;UBERON:0000924!3.39e-16!173;UBERON:0006601!3.39e-16!173;UBERON:0001950!4.18e-16!20;UBERON:0000153!4.50e-16!129;UBERON:0007811!4.50e-16!129;UBERON:0004121!6.96e-16!169;UBERON:0000200!1.49e-08!6;UBERON:0007023!1.44e-07!115;UBERON:0001872!4.17e-07!5;UBERON:0002771!6.06e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;3.11e-21;2!UBERON:0002346;2.94e-11;4!UBERON:0000923;2.94e-11;4!UBERON:0010316;2.94e-11;4!UBERON:0005291;2.94e-11;4!UBERON:0002050;2.86e-09;5!UBERON:0005423;2.86e-09;5!UBERON:0000200;5.54e-08;6!UBERON:0002037;7.01e-08;6!UBERON:0001871;5.08e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.11e-21,2;UBERON:0000200,5.54e-08,6;UBERON:0002037,6.78e-08,6;UBERON:0006215,6.78e-08,6;UBERON:0001871,5.08e-07,6 | |||
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| ||
|short_description=p13@C12orf53 | |||
}} | }} |
Latest revision as of 01:42, 20 September 2015
Short description: | p13@C12orf53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_C12orf53_5end |
Coexpression cluster: | C1173_medial_Neurons_parietal_temporal_medulloblastoma_occipital_duodenum |
Association with transcript: | -447bp_to_AL831874_5end |
EntrezGene: | C12orf53 |
HGNC: | 25338 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.92e-08 | 6 |
neuroblast | 5.92e-08 | 6 |
electrically signaling cell | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 3.11e-21 | 2 |
gyrus | 5.54e-08 | 6 |
cerebellum | 6.78e-08 | 6 |
rhombic lip | 6.78e-08 | 6 |
temporal lobe | 5.08e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.09e-14 | 3 |
leiomyoma | 2.09e-14 | 3 |
benign neoplasm | 3.79e-11 | 4 |