FFCP PHASE1:Hg19::chr10:96305535..96305598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3070 | |EntrezGene=3070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4861 | |HGNC=4861 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRZ9,B1ALG6 | |UniProt=Q9NRZ9,B1ALG6 | ||
|association_with_transcript=0bp_to_ENST00000348459,ENST00000394036,ENST00000394044,ENST00000394045,ENST00000419900,NM_018063,uc001kjs.2,uc001kjt.2,uc001kju.2,uc009xul.2,uc009xum.2,uc009xun.2,uc009xuo.2,uc009xup.2,uc009xuq.2,uc009xur.2_5end | |association_with_transcript=0bp_to_ENST00000348459,ENST00000394036,ENST00000394044,ENST00000394045,ENST00000419900,NM_018063,uc001kjs.2,uc001kjt.2,uc001kju.2,uc009xul.2,uc009xum.2,uc009xun.2,uc009xuo.2,uc009xup.2,uc009xuq.2,uc009xur.2_5end | ||
|cluster_id=chr10:96305535..96305598,+ | |||
|coexpression_cluster_id=C3061 | |coexpression_cluster_id=C3061 | ||
|description=CAGE_peak_1_at_HELLS_5end | |description=CAGE_peak_1_at_HELLS_5end | ||
|id=chr10:96305535..96305598,+ | |id=chr10:96305535..96305598,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.16e-11!254;CL:0002319!3.51e-07!25 | |ontology_enrichment_celltype=CL:0000066!3.16e-11!254;CL:0002319!3.51e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.27e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.88e-11,253;CL:0002319,3.41e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.97e-56!235;DOID:14566!4.38e-54!239;DOID:0050687!1.59e-33!143;DOID:305!1.82e-26!106;DOID:0050686!2.52e-26!137;DOID:2531!6.45e-16!51;DOID:0060083!6.45e-16!51;DOID:1240!9.92e-13!39;DOID:8692!3.51e-09!31;DOID:3095!2.07e-08!22;DOID:2994!2.07e-08!22;DOID:7!3.71e-07!39 | |ontology_enrichment_disease=DOID:162!3.97e-56!235;DOID:14566!4.38e-54!239;DOID:0050687!1.59e-33!143;DOID:305!1.82e-26!106;DOID:0050686!2.52e-26!137;DOID:2531!6.45e-16!51;DOID:0060083!6.45e-16!51;DOID:1240!9.92e-13!39;DOID:8692!3.51e-09!31;DOID:3095!2.07e-08!22;DOID:2994!2.07e-08!22;DOID:7!3.71e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:2531;2.98e-10;51!DOID:0060083;2.98e-10;51!DOID:1240;4.41e-10;39!DOID:8692;7.01e-09;31!DOID:305;1.38e-08;106!DOID:3095;1.87e-08;22!DOID:2994;1.87e-08;22!DOID:0050687;1.96e-08;143!DOID:14566;2.58e-07;239!DOID:162;6.02e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.99e-56,235;DOID:14566,4.19e-54,239;DOID:0050687,1.35e-33,143;DOID:305,1.60e-26,106;DOID:0050686,2.22e-26,137;DOID:2531,5.99e-16,51;DOID:0060083,5.99e-16,51;DOID:1240,9.36e-13,39;DOID:8692,3.38e-09,31;DOID:3095,2.00e-08,22;DOID:2994,2.00e-08,22;DOID:7,4.15e-07,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@HELLS | |short_description=p1@HELLS | ||
}} | }} |
Latest revision as of 02:19, 20 September 2015
Short description: | p1@HELLS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HELLS_5end |
Coexpression cluster: | C3061_granulocyte_testicular_hepatoblastoma_HES3GFP_retinoblastoma_H9_Hodgkin |
Association with transcript: | 0bp_to_ENST00000348459, ENST00000394036, ENST00000394044, ENST00000394045, ENST00000419900, NM_018063, uc001kjs.2, uc001kjt.2, uc001kju.2, uc009xul.2, uc009xum.2, uc009xun.2, uc009xuo.2, uc009xup.2, uc009xuq.2, uc009xur.2_5end |
EntrezGene: | HELLS |
HGNC: | 4861 |
UniProt: | Q9NRZ9B1ALG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.88e-11 | 253 |
neural cell | 3.41e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.99e-56 | 235 |
disease of cellular proliferation | 4.19e-54 | 239 |
cell type cancer | 1.35e-33 | 143 |
carcinoma | 1.60e-26 | 106 |
organ system cancer | 2.22e-26 | 137 |
hematologic cancer | 5.99e-16 | 51 |
immune system cancer | 5.99e-16 | 51 |
leukemia | 9.36e-13 | 39 |
myeloid leukemia | 3.38e-09 | 31 |
germ cell and embryonal cancer | 2.00e-08 | 22 |
germ cell cancer | 2.00e-08 | 22 |
disease of anatomical entity | 4.15e-07 | 39 |