FFCP PHASE1:Hg19::chr3:124606225..124606243,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:124606225..124606243,-
|short_description=p6@ITGB5
|description=CAGE_peak_6_at_ITGB5_5end
|association_with_transcript=-81bp_to_ENST00000296181,NM_002213,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3693 | |EntrezGene=3693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6160 | |HGNC=6160 | ||
|TSSclassifier=strong | |||
|UniProt=P18084 | |UniProt=P18084 | ||
|association_with_transcript=-81bp_to_ENST00000296181,NM_002213,uc003eho.2_5end | |||
|cluster_id=chr3:124606225..124606243,- | |||
|coexpression_cluster_id=C2716 | |||
|description=CAGE_peak_6_at_ITGB5_5end | |||
|id=chr3:124606225..124606243,- | |||
|ontology_enrichment_celltype=CL:0000055!6.98e-26!180;CL:0000057!4.41e-15!75;CL:0000680!9.07e-10!57;CL:0000056!9.07e-10!57;CL:0000355!9.07e-10!57;CL:0000183!1.18e-09!59;CL:0000222!1.44e-09!119;CL:0002321!2.51e-09!248;CL:0000136!3.11e-09!15;CL:0000220!3.48e-09!246;CL:0000192!1.09e-08!42;CL:0000514!1.09e-08!42;CL:0000187!1.40e-08!54;CL:0000359!6.14e-08!32;CL:0000393!1.01e-07!60;CL:0000211!1.01e-07!60;CL:0002334!2.21e-07!12;CL:0000548!7.31e-07!679;CL:0000004!7.31e-07!679;CL:0000255!7.31e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.79e-09;13!CL:0000134;2.10e-09;55!CL:0000048;6.59e-09;58!CL:0000359;1.23e-08;32!CL:0002334;3.41e-08;12!CL:0000349;5.96e-08;19!CL:0000723;7.99e-08;61!CL:0000192;1.07e-07;43!CL:0000034;7.60e-07;69!CL:0002320;9.12e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.80e-15,76;CL:0000136,2.76e-10,15;CL:0000680,5.28e-10,58;CL:0000056,5.28e-10,58;CL:0000355,5.28e-10,58;CL:0000192,1.31e-09,43;CL:0000514,1.31e-09,43;CL:0000359,4.92e-09,32;CL:0000187,1.04e-08,55;CL:0002334,3.49e-08,12;CL:0000393,3.89e-08,61;CL:0000211,3.89e-08,61;CL:0000349,6.62e-08,19;CL:0000048,1.62e-07,427;CL:0000723,2.36e-07,433;CL:0000034,2.77e-07,441;CL:0000222,3.93e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.54e-16!118;UBERON:0000468!6.26e-16!659;UBERON:0002100!1.53e-15!216;UBERON:0005256!3.53e-14!143;UBERON:0004872!1.31e-13!84;UBERON:0000475!1.76e-13!365;UBERON:0000467!2.02e-12!625;UBERON:0000480!2.09e-12!626;UBERON:0000119!3.41e-11!312;UBERON:0000483!6.12e-11!309;UBERON:0000486!7.99e-11!82;UBERON:0003104!1.02e-10!238;UBERON:0009142!1.02e-10!238;UBERON:0000490!1.90e-10!138;UBERON:0000926!4.75e-10!448;UBERON:0004120!4.75e-10!448;UBERON:0006603!4.75e-10!448;UBERON:0000914!7.77e-10!83;UBERON:0002329!7.77e-10!83;UBERON:0003077!7.77e-10!83;UBERON:0003059!7.77e-10!83;UBERON:0007282!7.77e-10!83;UBERON:0009618!7.77e-10!83;UBERON:0007285!7.77e-10!83;UBERON:0001048!8.96e-10!168;UBERON:0001637!9.86e-10!42;UBERON:0003509!9.86e-10!42;UBERON:0004572!9.86e-10!42;UBERON:0004290!1.20e-09!70;UBERON:0002049!1.71e-09!79;UBERON:0007798!1.71e-09!79;UBERON:0000477!2.09e-09!286;UBERON:0001981!3.28e-09!60;UBERON:0007500!3.28e-09!60;UBERON:0004537!3.28e-09!60;UBERON:0006965!3.28e-09!60;UBERON:0000055!3.69e-09!69;UBERON:0000481!4.93e-09!347;UBERON:0004573!8.26e-09!33;UBERON:0004571!8.26e-09!33;UBERON:0001009!1.50e-08!113;UBERON:0001134!2.23e-08!61;UBERON:0002036!2.23e-08!61;UBERON:0003082!2.23e-08!61;UBERON:0004535!2.33e-08!110;UBERON:0002385!3.09e-08!63;UBERON:0001015!3.09e-08!63;UBERON:0000383!3.09e-08!63;UBERON:0000922!3.68e-08!612;UBERON:0004111!8.33e-08!241;UBERON:0000923!1.06e-07!604;UBERON:0005291!1.06e-07!604;UBERON:0006598!1.06e-07!604;UBERON:0002532!1.06e-07!604;UBERON:0002050!1.09e-07!605;UBERON:0005423!1.09e-07!605;UBERON:0003102!3.34e-07!95;UBERON:0001013!3.88e-07!14;UBERON:0002199!4.26e-07!45;UBERON:0002416!4.26e-07!45;UBERON:0004923!4.92e-07!57;UBERON:0009569!5.82e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.39e-09;33!UBERON:0004571;7.39e-09;33!UBERON:0001637;5.12e-08;42!UBERON:0003509;5.12e-08;42!UBERON:0004572;5.12e-08;42!UBERON:0001013;9.39e-08;14!UBERON:0002384;8.33e-07;198 | |||
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| ||
|short_description=p6@ITGB5 | |||
}} | }} |
Latest revision as of 02:42, 20 September 2015
Short description: | p6@ITGB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ITGB5_5end |
Coexpression cluster: | C2716_Osteoblast_leiomyoma_Preadipocyte_Adipocyte_mesenchymal_Smooth_Mesothelial |
Association with transcript: | -81bp_to_ENST00000296181, NM_002213, uc003eho.2_5end |
EntrezGene: | ITGB5 |
HGNC: | 6160 |
UniProt: | P18084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.80e-15 | 76 |
fat cell | 2.76e-10 | 15 |
muscle precursor cell | 5.28e-10 | 58 |
myoblast | 5.28e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.28e-10 | 58 |
smooth muscle cell | 1.31e-09 | 43 |
smooth muscle myoblast | 1.31e-09 | 43 |
vascular associated smooth muscle cell | 4.92e-09 | 32 |
muscle cell | 1.04e-08 | 55 |
preadipocyte | 3.49e-08 | 12 |
electrically responsive cell | 3.89e-08 | 61 |
electrically active cell | 3.89e-08 | 61 |
extraembryonic cell | 6.62e-08 | 19 |
multi fate stem cell | 1.62e-07 | 427 |
somatic stem cell | 2.36e-07 | 433 |
stem cell | 2.77e-07 | 441 |
mesodermal cell | 3.93e-07 | 121 |