FFCP PHASE1:Hg19::chr12:6881662..6881675,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6881662..6881675,+
|short_description=p2@LAG3
|description=CAGE_peak_2_at_LAG3_5end
|association_with_transcript=0bp_to_NM_002286,uc001qqs.2,uc001qqt.3_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3902 | |EntrezGene=3902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6476 | |HGNC=6476 | ||
|TSSclassifier=strong | |||
|UniProt=P18627,Q7Z643 | |UniProt=P18627,Q7Z643 | ||
|association_with_transcript=0bp_to_NM_002286,uc001qqs.2,uc001qqt.3_5end | |||
|cluster_id=chr12:6881662..6881675,+ | |||
|coexpression_cluster_id=C2233 | |||
|description=CAGE_peak_2_at_LAG3_5end | |||
|id=chr12:6881662..6881675,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.08e-19!18;CL:0000789!1.08e-19!18;CL:0002420!1.08e-19!18;CL:0002419!1.08e-19!18;CL:0000790!1.08e-19!18;CL:0000542!2.47e-15!53;CL:0000051!2.47e-15!53;CL:0000625!5.81e-15!11;CL:0000838!9.05e-15!52;CL:0000084!2.11e-14!25;CL:0000827!2.11e-14!25;CL:0000738!7.67e-09!140;CL:0002087!2.33e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.78e-36;18!CL:0000789;1.78e-36;18!CL:0002419;1.78e-36;18!CL:0000625;7.81e-30;11!CL:0000084;1.02e-28;25!CL:0000542;2.34e-13;53!CL:0000623;3.10e-09;3!CL:0000624;4.78e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.41e-37,18;CL:0000789,7.41e-37,18;CL:0002420,7.41e-37,18;CL:0002419,7.41e-37,18;CL:0000790,7.41e-37,18;CL:0000625,4.33e-30,11;CL:0000084,5.32e-29,25;CL:0000827,5.32e-29,25;CL:0000838,3.14e-28,52;CL:0000542,1.46e-27,53;CL:0000051,1.46e-27,53;CL:0002087,5.27e-13,115;CL:0000738,9.16e-12,136;CL:0002031,3.92e-10,120;CL:0000623,2.59e-09,3;CL:0000825,2.59e-09,3;CL:0000037,6.96e-09,168;CL:0000988,4.72e-08,177;CL:0002032,4.99e-08,161;CL:0000837,4.99e-08,161;CL:0000624,3.71e-07,6;CL:0000893,6.60e-07,2;CL:0002489,6.60e-07,2;CL:0000809,6.60e-07,2;CL:0000808,6.60e-07,2;CL:0000894,6.60e-07,2;CL:0000806,6.60e-07,2;CL:0000807,6.60e-07,2;CL:0000805,6.60e-07,2;CL:0002425,6.60e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.78e-36;18!CL:0000051;2.34e-13;53!CL:0002425;9.98e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.38e-29!115;UBERON:0000178!3.49e-07!15;UBERON:0000179!3.49e-07!15;UBERON:0000463!3.49e-07!15;UBERON:0004177!6.77e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.74e-10;15!UBERON:0000179;3.74e-10;15!UBERON:0000463;3.74e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.20e-10,15;UBERON:0000179,3.20e-10,15;UBERON:0000463,3.20e-10,15;UBERON:0004177,7.30e-07,7;UBERON:0005057,7.30e-07,7;UBERON:0007023,9.18e-07,114 | |||
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| ||
|short_description=p2@LAG3 | |||
}} | }} |
Latest revision as of 03:11, 20 September 2015
Short description: | p2@LAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LAG3_5end |
Coexpression cluster: | C2233_CD4_NK_spleen_adult_lymphangiectasia_appendix_CD8 |
Association with transcript: | 0bp_to_NM_002286, uc001qqs.2, uc001qqt.3_5end |
EntrezGene: | LAG3 |
HGNC: | 6476 |
UniProt: | P18627Q7Z643 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 3.20e-10 | 15 |
haemolymphatic fluid | 3.20e-10 | 15 |
organism substance | 3.20e-10 | 15 |
hemopoietic organ | 7.30e-07 | 7 |
immune organ | 7.30e-07 | 7 |
adult organism | 9.18e-07 | 114 |