FFCP PHASE1:Hg19::chr17:38911580..38911584,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147183 | |EntrezGene=147183 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30839 | |HGNC=30839 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z3Z0,E7ENV4,Q6ZPD6 | |UniProt=Q7Z3Z0,E7ENV4,Q6ZPD6 | ||
|association_with_transcript=0bp_to_ENST00000312150,ENST00000394042,NM_181534,uc002hve.2_5end | |association_with_transcript=0bp_to_ENST00000312150,ENST00000394042,NM_181534,uc002hve.2_5end | ||
|cluster_id=chr17:38911580..38911584,- | |||
|coexpression_cluster_id=C208 | |coexpression_cluster_id=C208 | ||
|description=CAGE_peak_1_at_KRT25_5end | |description=CAGE_peak_1_at_KRT25_5end | ||
|id=chr17:38911580..38911584,- | |id=chr17:38911580..38911584,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.39e-66;1 | |||
|ontology_enrichment_disease=DOID:0060060!4.44e-18!1;DOID:0060061!4.44e-18!1;DOID:8691!4.44e-18!1;DOID:178!5.26e-18!1;DOID:326!5.26e-18!1;DOID:3978!5.26e-18!1;DOID:3394!5.26e-18!1;DOID:5844!5.26e-18!1;DOID:3151!8.72e-18!1;DOID:3149!8.72e-18!1;DOID:114!1.12e-09!2;DOID:3451!1.44e-09!2;DOID:4159!1.44e-09!2;DOID:0060122!1.44e-09!2 | |ontology_enrichment_disease=DOID:0060060!4.44e-18!1;DOID:0060061!4.44e-18!1;DOID:8691!4.44e-18!1;DOID:178!5.26e-18!1;DOID:326!5.26e-18!1;DOID:3978!5.26e-18!1;DOID:3394!5.26e-18!1;DOID:5844!5.26e-18!1;DOID:3151!8.72e-18!1;DOID:3149!8.72e-18!1;DOID:114!1.12e-09!2;DOID:3451!1.44e-09!2;DOID:4159!1.44e-09!2;DOID:0060122!1.44e-09!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!2.66e-18!1;UBERON:0002426!3.75e-18!1;UBERON:0003831!3.75e-18!1;UBERON:0003898!3.75e-18!1;UBERON:0004830!3.75e-18!1;UBERON:0001774!3.75e-18!1;UBERON:0003830!3.75e-18!1;UBERON:0005175!3.75e-18!1;UBERON:0003897!3.75e-18!1;UBERON:0001103!3.75e-18!1;UBERON:0010084!3.75e-18!1;UBERON:0000014!1.13e-17!4;UBERON:0001882!1.70e-17!1;UBERON:0005403!1.70e-17!1;UBERON:0001630!9.46e-10!2;UBERON:0005090!9.46e-10!2;UBERON:0002240!8.15e-07!3;UBERON:0000988!9.64e-07!3 | |ontology_enrichment_uberon=UBERON:0007029!2.66e-18!1;UBERON:0002426!3.75e-18!1;UBERON:0003831!3.75e-18!1;UBERON:0003898!3.75e-18!1;UBERON:0004830!3.75e-18!1;UBERON:0001774!3.75e-18!1;UBERON:0003830!3.75e-18!1;UBERON:0005175!3.75e-18!1;UBERON:0003897!3.75e-18!1;UBERON:0001103!3.75e-18!1;UBERON:0010084!3.75e-18!1;UBERON:0000014!1.13e-17!4;UBERON:0001882!1.70e-17!1;UBERON:0005403!1.70e-17!1;UBERON:0001630!9.46e-10!2;UBERON:0005090!9.46e-10!2;UBERON:0002240!8.15e-07!3;UBERON:0000988!9.64e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.23e-66;1!UBERON:0002426;4.66e-66;1!UBERON:0003831;4.66e-66;1!UBERON:0003898;4.66e-66;1!UBERON:0004830;4.66e-66;1!UBERON:0003830;4.66e-66;1!UBERON:0005175;4.66e-66;1!UBERON:0001774;4.66e-66;1!UBERON:0001103;4.66e-66;1!UBERON:0005090;7.05e-34;2!UBERON:0001630;7.05e-34;2!UBERON:0000014;7.35e-18;4!UBERON:0000922;1.35e-08;49!UBERON:0002331;6.13e-08;10!UBERON:0001443;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.23e-66,1;UBERON:0002426,4.66e-66,1;UBERON:0003831,4.66e-66,1;UBERON:0003898,4.66e-66,1;UBERON:0004830,4.66e-66,1;UBERON:0003830,4.66e-66,1;UBERON:0005175,4.66e-66,1;UBERON:0001774,4.66e-66,1;UBERON:0001103,4.66e-66,1;UBERON:0010084,4.66e-66,1;UBERON:0005090,7.05e-34,2;UBERON:0001630,7.05e-34,2;UBERON:0000014,7.35e-18,4;UBERON:0002331,6.13e-08,10;UBERON:0000358,6.13e-08,10;UBERON:0000307,6.13e-08,10;UBERON:0000091,6.13e-08,10;UBERON:0000087,6.13e-08,10;UBERON:0007010,6.13e-08,10;UBERON:0007806,6.13e-08,10;UBERON:0008780,6.13e-08,10;UBERON:0005728,6.13e-08,10;UBERON:0001443,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.456441521597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,9.38563769613817,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.456441521597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,9.38563769613817,0,0,0,0,0 | ||
|short_description=p1@KRT25 | |short_description=p1@KRT25 | ||
}} | }} |
Latest revision as of 03:23, 20 September 2015
Short description: | p1@KRT25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT25_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | 0bp_to_ENST00000312150, ENST00000394042, NM_181534, uc002hve.2_5end |
EntrezGene: | KRT25 |
HGNC: | 30839 |
UniProt: | Q7Z3Z0E7ENV4Q6ZPD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface | 1.23e-66 | 1 |
chest muscle | 4.66e-66 | 1 |
respiratory system muscle | 4.66e-66 | 1 |
skeletal muscle of trunk | 4.66e-66 | 1 |
respiratory system skeletal muscle | 4.66e-66 | 1 |
thoracic segment muscle | 4.66e-66 | 1 |
chest organ | 4.66e-66 | 1 |
muscle of trunk | 4.66e-66 | 1 |
diaphragm | 4.66e-66 | 1 |
future diaphragm | 4.66e-66 | 1 |
muscle structure | 7.05e-34 | 2 |
muscle organ | 7.05e-34 | 2 |
zone of skin | 7.35e-18 | 4 |
umbilical cord | 6.13e-08 | 10 |
blastocyst | 6.13e-08 | 10 |
blastula | 6.13e-08 | 10 |
bilaminar disc | 6.13e-08 | 10 |
inner cell mass | 6.13e-08 | 10 |
cleaving embryo | 6.13e-08 | 10 |
connecting stalk | 6.13e-08 | 10 |
inner cell mass derived epiblast | 6.13e-08 | 10 |
extraembryonic mesoderm | 6.13e-08 | 10 |
chest | 2.63e-07 | 11 |