FFCP PHASE1:Hg19::chr4:102711936..102711947,+: Difference between revisions
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|id=chr4:102711936..102711947,+
|short_description=p6@BANK1
|description=CAGE_peak_6_at_BANK1_5end
|association_with_transcript=49bp_to_ENST00000508653_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55024 | |EntrezGene=55024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18233 | |HGNC=18233 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_ENST00000508653_5end | |||
|cluster_id=chr4:102711936..102711947,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_6_at_BANK1_5end | |||
|id=chr4:102711936..102711947,+ | |||
|ontology_enrichment_celltype=CL:0000236!1.19e-25!14;CL:0000945!6.82e-23!24;CL:0000826!6.82e-23!24;CL:0002087!3.07e-14!119;CL:0000037!7.91e-14!172;CL:0000566!7.91e-14!172;CL:0000988!2.20e-12!182;CL:0002032!2.95e-12!165;CL:0000837!2.95e-12!165;CL:0000738!2.03e-11!140;CL:0000542!4.76e-11!53;CL:0000051!4.76e-11!53;CL:0000838!4.58e-10!52;CL:0002031!1.31e-09!124;CL:0000842!3.23e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.92e-69;13!CL:0000945;5.11e-51;24!CL:0000542;1.41e-17;53!CL:0000946;1.59e-08;1!CL:0000786;1.59e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.72e-76,14;CL:0000945,6.03e-51,24;CL:0000826,6.03e-51,24;CL:0000838,3.01e-22,52;CL:0000542,8.79e-22,53;CL:0000051,8.79e-22,53;CL:0002087,4.01e-10,115;CL:0000946,1.78e-08,1;CL:0000786,1.78e-08,1;CL:0000980,1.78e-08,1;CL:0002031,3.40e-08,120;CL:0000738,3.58e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000051;1.41e-17;53!UBERON:0004872;5.08e-10;7!UBERON:0001045;8.05e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.54e-12!115;UBERON:0000178!2.79e-10!15;UBERON:0000179!2.79e-10!15;UBERON:0000463!2.79e-10!15;UBERON:0002193!5.35e-08!112;UBERON:0002390!9.49e-08!102;UBERON:0003061!9.49e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.59e-12;15!UBERON:0000179;6.59e-12;15!UBERON:0000463;6.59e-12;15!UBERON:0002106;9.82e-11;3!UBERON:0002390;1.23e-09;32!UBERON:0000029;7.18e-09;1!UBERON:0001154;8.05e-09;1!UBERON:0001153;8.05e-09;1!UBERON:0009854;8.05e-09;1!UBERON:0002372;9.73e-09;1!UBERON:0001961;9.73e-09;1!UBERON:0001744;9.73e-09;1!UBERON:0001042;9.73e-09;1!UBERON:0001735;9.73e-09;1!UBERON:0002193;9.90e-09;42!UBERON:0004177;8.92e-07;5!UBERON:0005057;8.92e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.29e-12,15;UBERON:0000179,6.29e-12,15;UBERON:0000463,6.29e-12,15;UBERON:0002106,7.67e-11,3;UBERON:0004854,7.67e-11,3;UBERON:0009034,7.67e-11,3;UBERON:0002095,7.67e-11,3;UBERON:0004782,7.67e-11,3;UBERON:0003281,7.67e-11,3;UBERON:0009664,7.67e-11,3;UBERON:0002296,7.67e-11,3;UBERON:0005602,7.67e-11,3;UBERON:0001179,7.67e-11,3;UBERON:0006293,7.67e-11,3;UBERON:0000029,7.18e-09,1;UBERON:0001154,8.36e-09,1;UBERON:0001153,8.36e-09,1;UBERON:0001045,8.36e-09,1;UBERON:0002372,9.74e-09,1;UBERON:0001961,9.74e-09,1;UBERON:0001744,9.74e-09,1;UBERON:0001735,9.74e-09,1 | |||
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| ||
|short_description=p6@BANK1 | |||
}} | }} |
Latest revision as of 03:24, 20 September 2015
Short description: | p6@BANK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BANK1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 49bp_to_ENST00000508653_5end |
EntrezGene: | BANK1 |
HGNC: | 18233 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.72e-76 | 14 |
lymphocyte of B lineage | 6.03e-51 | 24 |
pro-B cell | 6.03e-51 | 24 |
lymphoid lineage restricted progenitor cell | 3.01e-22 | 52 |
lymphocyte | 8.79e-22 | 53 |
common lymphoid progenitor | 8.79e-22 | 53 |
nongranular leukocyte | 4.01e-10 | 115 |
antibody secreting cell | 1.78e-08 | 1 |
plasma cell | 1.78e-08 | 1 |
plasmablast | 1.78e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 3.40e-08 | 120 |
leukocyte | 3.58e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 6.29e-12 | 15 |
haemolymphatic fluid | 6.29e-12 | 15 |
organism substance | 6.29e-12 | 15 |
spleen | 7.67e-11 | 3 |
gastrointestinal system mesentery | 7.67e-11 | 3 |
stomach region | 7.67e-11 | 3 |
mesentery | 7.67e-11 | 3 |
gastrointestinal system serosa | 7.67e-11 | 3 |
mesentery of stomach | 7.67e-11 | 3 |
gut mesentery | 7.67e-11 | 3 |
dorsal mesentery | 7.67e-11 | 3 |
dorsal mesogastrium | 7.67e-11 | 3 |
peritoneal cavity | 7.67e-11 | 3 |
spleen primordium | 7.67e-11 | 3 |
lymph node | 7.18e-09 | 1 |
vermiform appendix | 8.36e-09 | 1 |
caecum | 8.36e-09 | 1 |
midgut | 8.36e-09 | 1 |
tonsil | 9.74e-09 | 1 |
mucosa-associated lymphoid tissue | 9.74e-09 | 1 |
lymphoid tissue | 9.74e-09 | 1 |
tonsillar ring | 9.74e-09 | 1 |