FFCP PHASE1:Hg19::chr14:50999764..50999775,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51062 | |EntrezGene=51062 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11231 | |HGNC=11231 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9T1 | |UniProt=G5E9T1 | ||
|association_with_transcript=20bp_to_ENST00000441560_5end | |association_with_transcript=20bp_to_ENST00000441560_5end | ||
|cluster_id=chr14:50999764..50999775,+ | |||
|description=CAGE_peak_9_at_ATL1_5end | |description=CAGE_peak_9_at_ATL1_5end | ||
|id=chr14:50999764..50999775,+ | |id=chr14:50999764..50999775,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.82e-17!53;CL:0000051!1.82e-17!53;CL:0000838!2.05e-16!52;CL:0000236!3.73e-11!14;CL:0000945!5.26e-11!24;CL:0000826!5.26e-11!24;CL:0000084!2.28e-08!25;CL:0000827!2.28e-08!25;CL:0000625!7.50e-07!11 | |ontology_enrichment_celltype=CL:0000542!1.82e-17!53;CL:0000051!1.82e-17!53;CL:0000838!2.05e-16!52;CL:0000236!3.73e-11!14;CL:0000945!5.26e-11!24;CL:0000826!5.26e-11!24;CL:0000084!2.28e-08!25;CL:0000827!2.28e-08!25;CL:0000625!7.50e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.95e-16;13!CL:0000945;4.34e-15;24!CL:0000542;4.24e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.26e-15,24;CL:0000826,4.26e-15,24;CL:0000236,9.29e-15,14;CL:0000838,9.54e-11,52;CL:0000542,1.51e-10,53;CL:0000051,1.51e-10,53 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.49e-23;1!UBERON:0008801;3.67e-23;1!CL:0000051;4.24e-12;53 | |||
|ontology_enrichment_disease=DOID:305!1.24e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!7.36e-07!11 | |ontology_enrichment_uberon=UBERON:0006562!7.36e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;7.82e-45;2!UBERON:0001044;9.92e-34;6!UBERON:0003293;9.92e-34;6!UBERON:0003294;9.92e-34;6!UBERON:0010047;9.92e-34;6!UBERON:0003408;9.92e-34;6!UBERON:0000167;9.92e-34;6!UBERON:0001736;1.49e-23;1!UBERON:0001831;3.67e-23;1!UBERON:0001567;3.67e-23;1!UBERON:0001041;6.52e-15;14!UBERON:0004089;2.74e-12;2!UBERON:0000161;3.61e-11;19!UBERON:0000166;3.61e-11;19!UBERON:0004921;3.20e-10;33!UBERON:0000165;8.90e-08;28!UBERON:0002365;6.00e-07;31!UBERON:0002330;6.00e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,9.79e-45,2;UBERON:0001044,1.05e-33,6;UBERON:0003293,1.05e-33,6;UBERON:0003294,1.05e-33,6;UBERON:0010047,1.05e-33,6;UBERON:0000167,1.05e-33,6;UBERON:0001736,1.67e-23,1;UBERON:0006298,1.67e-23,1;UBERON:0001831,4.10e-23,1;UBERON:0001567,4.10e-23,1;UBERON:0008801,4.10e-23,1;UBERON:0003408,1.47e-20,10;UBERON:0004089,2.90e-12,2;UBERON:0000166,9.98e-10,22;UBERON:0000165,1.59e-07,29;UBERON:0000930,1.59e-07,29;UBERON:0002365,4.48e-07,31;UBERON:0002330,4.48e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236132343941038,0,0,0,0,0,0,5.34523684004081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0.889509253863555,0.426730222566507,0.400395987036012,1.14950487990897,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0.651844533267181,0,0,0,0,0,0,0,0,0,0,0,0.444859689486181,0.267540828089713,0,0,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0.950452044448374,0.150575119077773,0.639933055772092,0,0.236777252044017,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0.540031437238115,0,0,0,0.490080431962063,0.371606350251437,0.144269212976445,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0.503865495708552,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.471878893390961,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0,0,0.766574565837572,0,0,0,0,0,0.230467975111559,0,0.135939465953663,0,0.118193840883968,0.111231401892069,0.235479278551542,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,2.58136415292167,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0.397901550322736,0,0.22589216407792,0,0.754814217833368,0.154348316215889,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,2.2936464170227,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0.193766729508018,0.31037357147929,0,0.12729431655633,0,0.217716747896961,0.342233301085281,0.336760265072938,0.573777643141411,0,0.325613074443898,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236132343941038,0,0,0,0,0,0,5.34523684004081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0.889509253863555,0.426730222566507,0.400395987036012,1.14950487990897,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0.651844533267181,0,0,0,0,0,0,0,0,0,0,0,0.444859689486181,0.267540828089713,0,0,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0.950452044448374,0.150575119077773,0.639933055772092,0,0.236777252044017,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0.540031437238115,0,0,0,0.490080431962063,0.371606350251437,0.144269212976445,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0.503865495708552,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.471878893390961,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0,0,0.766574565837572,0,0,0,0,0,0.230467975111559,0,0.135939465953663,0,0.118193840883968,0.111231401892069,0.235479278551542,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,2.58136415292167,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0.397901550322736,0,0.22589216407792,0,0.754814217833368,0.154348316215889,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,2.2936464170227,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0.193766729508018,0.31037357147929,0,0.12729431655633,0,0.217716747896961,0.342233301085281,0.336760265072938,0.573777643141411,0,0.325613074443898,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p9@ATL1 | |short_description=p9@ATL1 | ||
}} | }} |
Latest revision as of 03:50, 20 September 2015
Short description: | p9@ATL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ATL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000441560_5end |
EntrezGene: | ATL1 |
HGNC: | 11231 |
UniProt: | G5E9T1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.26e-15 | 24 |
pro-B cell | 4.26e-15 | 24 |
B cell | 9.29e-15 | 14 |
lymphoid lineage restricted progenitor cell | 9.54e-11 | 52 |
lymphocyte | 1.51e-10 | 53 |
common lymphoid progenitor | 1.51e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 9.79e-45 | 2 |
saliva-secreting gland | 1.05e-33 | 6 |
gland of oral region | 1.05e-33 | 6 |
gland of foregut | 1.05e-33 | 6 |
oral gland | 1.05e-33 | 6 |
oral cavity | 1.05e-33 | 6 |
submandibular gland | 1.67e-23 | 1 |
submandibular gland primordium | 1.67e-23 | 1 |
parotid gland | 4.10e-23 | 1 |
cheek | 4.10e-23 | 1 |
parotid gland primordium | 4.10e-23 | 1 |
gland of gut | 1.47e-20 | 10 |
midface | 2.90e-12 | 2 |
oral opening | 9.98e-10 | 22 |
mouth | 1.59e-07 | 29 |
stomodeum | 1.59e-07 | 29 |
exocrine gland | 4.48e-07 | 31 |
exocrine system | 4.48e-07 | 31 |