FFCP PHASE1:Hg19::chr4:103422457..103422469,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4790 | |EntrezGene=4790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7794 | |HGNC=7794 | ||
|TSSclassifier=strong | |||
|UniProt=P19838 | |UniProt=P19838 | ||
|association_with_transcript=-16bp_to_ENST00000226574,NM_001165412,NM_003998,uc011cep.1,uc011ceq.1_5end | |association_with_transcript=-16bp_to_ENST00000226574,NM_001165412,NM_003998,uc011cep.1,uc011ceq.1_5end | ||
|cluster_id=chr4:103422457..103422469,+ | |||
|description=CAGE_peak_3_at_NFKB1_5end | |description=CAGE_peak_3_at_NFKB1_5end | ||
|id=chr4:103422457..103422469,+ | |id=chr4:103422457..103422469,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.29e-09!42;CL:0000860!1.41e-08!45 | |ontology_enrichment_celltype=CL:0002057!4.29e-09!42;CL:0000860!1.41e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.69e-17;33!CL:0002057;4.69e-17;33!CL:0000473;1.48e-10;39!CL:0000234;1.48e-10;39!CL:0000576;2.98e-08;48!CL:0000453;6.77e-07;5!CL:0000766;9.84e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.01e-16,42;CL:0002057,2.01e-16,42;CL:0000473,5.69e-13,48;CL:0000234,5.69e-13,48;CL:0000557,3.13e-11,67;CL:0000766,9.82e-11,72;CL:0000839,1.29e-09,66;CL:0002009,1.37e-09,61;CL:0002194,2.40e-08,59;CL:0000576,2.40e-08,59;CL:0000040,2.40e-08,59;CL:0000559,2.40e-08,59;CL:0000738,5.19e-08,136;CL:0000763,3.85e-07,108;CL:0000049,3.85e-07,108;CL:0000453,8.01e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.14e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.75e-08!115 | |ontology_enrichment_uberon=UBERON:0007023!5.75e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.49e-10,76;UBERON:0001474,4.81e-09,82;UBERON:0002405,6.22e-09,93;UBERON:0002390,5.25e-08,98;UBERON:0003061,5.25e-08,98;UBERON:0004765,3.13e-07,90;UBERON:0002193,6.50e-07,108;UBERON:0001434,8.85e-07,100 | |||
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| ||
|short_description=p3@NFKB1 | |short_description=p3@NFKB1 | ||
}} | }} |
Latest revision as of 03:55, 20 September 2015
Short description: | p3@NFKB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NFKB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000226574, NM_001165412, NM_003998, uc011cep.1, uc011ceq.1_5end |
EntrezGene: | NFKB1 |
HGNC: | 7794 |
UniProt: | P19838 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.01e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.01e-16 | 42 |
defensive cell | 5.69e-13 | 48 |
phagocyte | 5.69e-13 | 48 |
granulocyte monocyte progenitor cell | 3.13e-11 | 67 |
myeloid leukocyte | 9.82e-11 | 72 |
myeloid lineage restricted progenitor cell | 1.29e-09 | 66 |
macrophage dendritic cell progenitor | 1.37e-09 | 61 |
monopoietic cell | 2.40e-08 | 59 |
monocyte | 2.40e-08 | 59 |
monoblast | 2.40e-08 | 59 |
promonocyte | 2.40e-08 | 59 |
leukocyte | 5.19e-08 | 136 |
myeloid cell | 3.85e-07 | 108 |
common myeloid progenitor | 3.85e-07 | 108 |
Langerhans cell | 8.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.49e-10 | 76 |
bone element | 4.81e-09 | 82 |
immune system | 6.22e-09 | 93 |
hematopoietic system | 5.25e-08 | 98 |
blood island | 5.25e-08 | 98 |
skeletal element | 3.13e-07 | 90 |
hemolymphoid system | 6.50e-07 | 108 |
skeletal system | 8.85e-07 | 100 |