FFCP PHASE1:Hg19::chr16:1031762..1031781,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=30812 | |EntrezGene=30812 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=11203 | |HGNC=11203 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P57073 | |UniProt=P57073 | ||
|association_with_transcript=-26bp_to_ENST00000293894,NM_014587,uc002ckn.2_5end | |association_with_transcript=-26bp_to_ENST00000293894,NM_014587,uc002ckn.2_5end | ||
|cluster_id=chr16:1031762..1031781,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_SOX8_5end | |description=CAGE_peak_1_at_SOX8_5end | ||
Latest revision as of 04:17, 20 September 2015
| Short description: | p1@SOX8 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SOX8_5end |
| Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
| Association with transcript: | -26bp_to_ENST00000293894, NM_014587, uc002ckn.2_5end |
| EntrezGene: | SOX8 |
| HGNC: | 11203 |
| UniProt: | P57073 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SOX8 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 2.63e-64 | 56 |
| neural rod | 2.63e-64 | 56 |
| future spinal cord | 2.63e-64 | 56 |
| neural keel | 2.63e-64 | 56 |
| central nervous system | 4.84e-62 | 81 |
| nervous system | 9.33e-62 | 89 |
| regional part of nervous system | 9.36e-60 | 53 |
| regional part of brain | 9.36e-60 | 53 |
| neurectoderm | 1.72e-55 | 86 |
| neural plate | 2.97e-55 | 82 |
Showing 1 to 10 of 74 entries
