FFCP PHASE1:Hg19::chr14:51955502..51955515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-302bp_to_ENST00000556137_5end | |association_with_transcript=-302bp_to_ENST00000556137_5end | ||
|cluster_id=chr14:51955502..51955515,+ | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_17_at_FRMD6_5end | |description=CAGE_peak_17_at_FRMD6_5end | ||
|id=chr14:51955502..51955515,+ | |id=chr14:51955502..51955515,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.40e-24!43;CL:0000066!4.41e-19!254;CL:0002368!1.05e-18!13;CL:0000223!2.70e-18!59;CL:0000076!3.11e-16!62;CL:0002159!1.18e-14!13;CL:0002621!4.95e-11!3;CL:0002166!8.04e-11!3;CL:0002251!1.95e-10!21;CL:0002328!2.95e-10!3;CL:0000240!8.27e-09!6;CL:0000311!8.27e-09!6;CL:0000079!8.27e-09!6;CL:0000237!8.27e-09!6;CL:0000036!8.27e-09!6;CL:0000357!8.27e-09!6;CL:0000114!8.27e-09!6;CL:0002202!9.07e-09!9;CL:0002632!9.07e-09!9;CL:0000220!4.82e-08!246;CL:0002321!6.53e-08!248;CL:0000244!8.01e-08!4;CL:0000731!8.01e-08!4;CL:0002077!9.11e-08!33;CL:0002327!1.08e-07!4 | |ontology_enrichment_celltype=CL:0002076!1.40e-24!43;CL:0000066!4.41e-19!254;CL:0002368!1.05e-18!13;CL:0000223!2.70e-18!59;CL:0000076!3.11e-16!62;CL:0002159!1.18e-14!13;CL:0002621!4.95e-11!3;CL:0002166!8.04e-11!3;CL:0002251!1.95e-10!21;CL:0002328!2.95e-10!3;CL:0000240!8.27e-09!6;CL:0000311!8.27e-09!6;CL:0000079!8.27e-09!6;CL:0000237!8.27e-09!6;CL:0000036!8.27e-09!6;CL:0000357!8.27e-09!6;CL:0000114!8.27e-09!6;CL:0002202!9.07e-09!9;CL:0002632!9.07e-09!9;CL:0000220!4.82e-08!246;CL:0002321!6.53e-08!248;CL:0000244!8.01e-08!4;CL:0000731!8.01e-08!4;CL:0002077!9.11e-08!33;CL:0002327!1.08e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.19e-23;3!CL:0002166;2.75e-23;3!CL:0002368;4.69e-20;13!CL:0002076;4.72e-19;42!CL:0002159;1.36e-18;14!CL:0000240;1.67e-11;6!CL:0000311;1.67e-11;6!CL:0000079;1.67e-11;6!CL:0000237;1.67e-11;6!CL:0002231;6.94e-11;3!CL:0002077;8.12e-11;34!CL:0000307;1.14e-10;3!CL:0002336;1.27e-08;1!CL:0002261;1.27e-08;1!CL:0002170;1.27e-08;1!CL:0002202;6.15e-08;9!CL:0002632;6.15e-08;9!CL:0000362;7.81e-08;9!CL:0000312;9.73e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.15e-23,3;CL:0002076,1.46e-23,42;CL:0002166,3.59e-23,3;CL:0002368,3.24e-20,13;CL:0002159,2.46e-18,14;CL:0000223,1.80e-16,58;CL:0000066,1.09e-15,253;CL:0002077,1.20e-12,34;CL:0000240,2.12e-11,6;CL:0000311,2.12e-11,6;CL:0000079,2.12e-11,6;CL:0000237,2.12e-11,6;CL:0000036,2.12e-11,6;CL:0000357,2.12e-11,6;CL:0000114,2.12e-11,6;CL:0002231,5.69e-11,3;CL:0000068,1.20e-10,3;CL:0000069,1.20e-10,3;CL:0000307,1.20e-10,3;CL:0000377,1.20e-10,3;CL:0002321,4.07e-09,250;CL:0002336,7.75e-09,1;CL:0002261,7.75e-09,1;CL:0002170,7.75e-09,1;CL:0002202,6.38e-08,9;CL:0002632,6.38e-08,9;CL:0000362,1.13e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.67e-11;6!CL:0000114;1.67e-11;6!CL:0000223;3.08e-11;58!CL:0000377;1.14e-10;3!UBERON:0009143;1.27e-08;1 | |||
|ontology_enrichment_disease=DOID:1749!1.25e-28!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!6.02e-16!35;UBERON:0003729!7.97e-15!5;UBERON:0001004!1.12e-13!72;UBERON:0000166!1.23e-12!21;UBERON:0003343!7.96e-12!4;UBERON:0004785!7.96e-12!4;UBERON:0004119!2.37e-11!169;UBERON:0000925!2.37e-11!169;UBERON:0006595!2.37e-11!169;UBERON:0000344!2.63e-11!12;UBERON:0003102!4.89e-11!95;UBERON:0000165!4.94e-11!28;UBERON:0000930!4.94e-11!28;UBERON:0001949!4.95e-11!3;UBERON:0000365!2.37e-10!5;UBERON:0004815!2.95e-10!3;UBERON:0002031!2.95e-10!3;UBERON:0005910!1.26e-08!6;UBERON:0000065!2.75e-08!53;UBERON:0001708!3.37e-08!4;UBERON:0001704!3.37e-08!4;UBERON:0002185!8.78e-08!4;UBERON:0001911!1.08e-07!4;UBERON:0005333!1.08e-07!4;UBERON:0008425!1.08e-07!4;UBERON:0005311!1.08e-07!4;UBERON:0007196!1.84e-07!14;UBERON:0001558!1.84e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.19e-23;3!UBERON:0001708;1.27e-17;4!UBERON:0008895;1.27e-17;4!UBERON:0011159;3.27e-14;5!UBERON:0000486;1.66e-10;12!UBERON:0003929;1.88e-10;7!UBERON:0003729;1.59e-09;13!UBERON:0003350;3.32e-09;8!UBERON:0001828;3.32e-09;8!UBERON:0004807;1.87e-08;22!UBERON:0010371;5.26e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.15e-23,3;UBERON:0001708,1.55e-17,4;UBERON:0008895,1.55e-17,4;UBERON:0011159,3.83e-14,5;UBERON:0010188,7.08e-12,6;UBERON:0002539,7.08e-12,6;UBERON:0008816,7.08e-12,6;UBERON:0003729,1.36e-09,13;UBERON:0003350,3.28e-09,8;UBERON:0001828,3.28e-09,8;UBERON:0003102,1.18e-08,99;UBERON:0001004,1.70e-08,74;UBERON:0004119,1.17e-07,160;UBERON:0000925,1.17e-07,160;UBERON:0006595,1.17e-07,160 | |||
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| ||
|short_description=p17@FRMD6 | |short_description=p17@FRMD6 | ||
}} | }} |
Latest revision as of 04:43, 20 September 2015
Short description: | p17@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_FRMD6_5end |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | -302bp_to_ENST00000556137_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.15e-23 | 3 |
endo-epithelial cell | 1.46e-23 | 42 |
epithelial cell of Malassez | 3.59e-23 | 3 |
respiratory epithelial cell | 3.24e-20 | 13 |
general ecto-epithelial cell | 2.46e-18 | 14 |
endodermal cell | 1.80e-16 | 58 |
epithelial cell | 1.09e-15 | 253 |
ecto-epithelial cell | 1.20e-12 | 34 |
stratified squamous epithelial cell | 2.12e-11 | 6 |
keratin accumulating cell | 2.12e-11 | 6 |
stratified epithelial cell | 2.12e-11 | 6 |
keratinizing barrier epithelial cell | 2.12e-11 | 6 |
epithelial fate stem cell | 2.12e-11 | 6 |
stratified epithelial stem cell | 2.12e-11 | 6 |
surface ectodermal cell | 2.12e-11 | 6 |
epithelial cell of prostate | 5.69e-11 | 3 |
duct epithelial cell | 1.20e-10 | 3 |
branched duct epithelial cell | 1.20e-10 | 3 |
tracheal epithelial cell | 1.20e-10 | 3 |
tracheoblast | 1.20e-10 | 3 |
embryonic cell | 4.07e-09 | 250 |
buccal mucosa cell | 7.75e-09 | 1 |
endothelial cell of viscerocranial mucosa | 7.75e-09 | 1 |
keratinized cell of the oral mucosa | 7.75e-09 | 1 |
epithelial cell of tracheobronchial tree | 6.38e-08 | 9 |
epithelial cell of lower respiratory tract | 6.38e-08 | 9 |
epidermal cell | 1.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.15e-23 | 3 |
jaw skeleton | 1.55e-17 | 4 |
splanchnocranium | 1.55e-17 | 4 |
primary subdivision of cranial skeletal system | 3.83e-14 | 5 |
protuberance | 7.08e-12 | 6 |
pharyngeal arch | 7.08e-12 | 6 |
embryonic head | 7.08e-12 | 6 |
mouth mucosa | 1.36e-09 | 13 |
epithelium of mucosa | 3.28e-09 | 8 |
gingiva | 3.28e-09 | 8 |
surface structure | 1.18e-08 | 99 |
respiratory system | 1.70e-08 | 74 |
endoderm-derived structure | 1.17e-07 | 160 |
endoderm | 1.17e-07 | 160 |
presumptive endoderm | 1.17e-07 | 160 |