FFCP PHASE1:Hg19::chr11:74442461..74442481,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25884 | |EntrezGene=25884 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24168 | |HGNC=24168 | ||
|TSSclassifier=strong | |||
|UniProt=Q6WN34 | |UniProt=Q6WN34 | ||
|association_with_transcript=-31bp_to_ENST00000376332_5end | |association_with_transcript=-31bp_to_ENST00000376332_5end | ||
|cluster_id=chr11:74442461..74442481,- | |||
|coexpression_cluster_id=C2164 | |coexpression_cluster_id=C2164 | ||
|description=CAGE_peak_1_at_CHRDL2_5end | |description=CAGE_peak_1_at_CHRDL2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002622;8.45e-08;3!CL:0000499;8.93e-07;28 | |ontology_enrichment_celltype_v019=CL:0002622;8.45e-08;3!CL:0000499;8.93e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.00e-07,3;CL:0000499,9.50e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.61e-09;65!UBERON:0003104;1.54e-08;31!UBERON:0005062;7.43e-07;4!UBERON:0007284;7.43e-07;4 | |ontology_enrichment_development_v019=UBERON:0006603;1.61e-09;65!UBERON:0003104;1.54e-08;31!UBERON:0005062;7.43e-07;4!UBERON:0007284;7.43e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-29!115;UBERON:0003101!1.49e-09!22;UBERON:0000079!1.49e-09!22;UBERON:0000481!2.00e-07!347;UBERON:0001046!3.42e-07!19;UBERON:0004122!9.23e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.79e-29!115;UBERON:0003101!1.49e-09!22;UBERON:0000079!1.49e-09!22;UBERON:0000481!2.00e-07!347;UBERON:0001046!3.42e-07!19;UBERON:0004122!9.23e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0003101;2.34e-13;22!UBERON:0000079;2.34e-13;22!UBERON:0003135;5.07e-10;11!UBERON:0005904;8.28e-10;4!UBERON:0004151;3.30e-09;3!UBERON:0003978;4.71e-09;3!UBERON:0000946;4.71e-09;3!UBERON:0006947;9.08e-08;3!UBERON:0004054;9.08e-08;3!UBERON:0007023;4.99e-07;114!UBERON:0007100;5.80e-07;25!UBERON:0001155;8.07e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0003101;2.34e-13;22!UBERON:0000079;2.34e-13;22!UBERON:0003135;5.07e-10;11!UBERON:0005904;8.28e-10;4!UBERON:0004151;3.30e-09;3!UBERON:0003978;4.71e-09;3!UBERON:0000946;4.71e-09;3!UBERON:0006947;9.08e-08;3!UBERON:0004054;9.08e-08;3!UBERON:0007023;4.99e-07;114!UBERON:0007100;5.80e-07;25!UBERON:0001155;8.07e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.68e-29,114;UBERON:0003101,2.74e-13,22;UBERON:0000079,2.74e-13,22;UBERON:0003135,5.49e-10,11;UBERON:0005904,8.90e-10,4;UBERON:0004122,3.19e-09,15;UBERON:0004151,3.26e-09,3;UBERON:0003978,4.71e-09,3;UBERON:0009751,4.71e-09,3;UBERON:0000946,4.71e-09,3;UBERON:0002523,4.71e-09,3;UBERON:0005983,4.71e-09,3;UBERON:0002165,4.71e-09,3;UBERON:0002062,4.71e-09,3;UBERON:0007280,4.71e-09,3;UBERON:0001046,7.40e-09,19;UBERON:0003064,2.13e-08,28;UBERON:0005156,7.95e-08,59;UBERON:0000990,7.95e-08,59;UBERON:0004921,8.08e-08,118;UBERON:0006947,9.53e-08,3;UBERON:0004054,9.53e-08,3;UBERON:0000162,1.01e-07,14;UBERON:0001353,1.01e-07,14;UBERON:0000163,1.01e-07,14;UBERON:0006866,1.01e-07,14;UBERON:0000164,1.01e-07,14;UBERON:0000931,1.01e-07,14;UBERON:0001155,7.38e-07,9 | |||
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| ||
|short_description=p1@CHRDL2 | |short_description=p1@CHRDL2 | ||
}} | }} |
Latest revision as of 05:05, 20 September 2015
Short description: | p1@CHRDL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHRDL2_5end |
Coexpression cluster: | C2164_gall_uterus_cervix_left_dura_sacrococcigeal_epididymis |
Association with transcript: | -31bp_to_ENST00000376332_5end |
EntrezGene: | CHRDL2 |
HGNC: | 24168 |
UniProt: | Q6WN34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.00e-07 | 3 |
stromal cell | 9.50e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.68e-29 | 114 |
male organism | 2.74e-13 | 22 |
male reproductive system | 2.74e-13 | 22 |
male reproductive organ | 5.49e-10 | 11 |
duct of male reproductive system | 8.90e-10 | 4 |
genitourinary system | 3.19e-09 | 15 |
cardiac chamber | 3.26e-09 | 3 |
valve | 4.71e-09 | 3 |
cardiac mesenchyme | 4.71e-09 | 3 |
cardial valve | 4.71e-09 | 3 |
tunica intima | 4.71e-09 | 3 |
heart layer | 4.71e-09 | 3 |
endocardium | 4.71e-09 | 3 |
endocardial cushion | 4.71e-09 | 3 |
presumptive endocardium | 4.71e-09 | 3 |
hindgut | 7.40e-09 | 19 |
intermediate mesoderm | 2.13e-08 | 28 |
reproductive structure | 7.95e-08 | 59 |
reproductive system | 7.95e-08 | 59 |
subdivision of digestive tract | 8.08e-08 | 118 |
male genital duct | 9.53e-08 | 3 |
internal male genitalia | 9.53e-08 | 3 |
cloaca | 1.01e-07 | 14 |
anal region | 1.01e-07 | 14 |
embryonic cloaca | 1.01e-07 | 14 |
terminal part of digestive tract | 1.01e-07 | 14 |
primitive urogenital sinus | 1.01e-07 | 14 |
proctodeum | 1.01e-07 | 14 |
colon | 7.38e-07 | 9 |