FFCP PHASE1:Hg19::chr7:95225631..95225666,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8812 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=105bp_to_ENST00000473301_5end | |||
|cluster_id=chr7:95225631..95225666,- | |||
|coexpression_cluster_id=C538 | |||
|description=CAGE_peak_2_at_PDK4_5end | |||
|id=chr7:95225631..95225666,- | |||
|ontology_enrichment_celltype=CL:0000136!2.09e-09!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.11e-17;13!CL:0002521;7.28e-08;3!CL:0002615;1.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.98e-15,15;CL:0002521,6.23e-08,3;CL:0002615,1.90e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006603;9.64e-09;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.93e-54!115;UBERON:0001049!7.40e-12!57;UBERON:0005068!7.40e-12!57;UBERON:0006241!7.40e-12!57;UBERON:0007135!7.40e-12!57;UBERON:0003080!2.77e-09!42;UBERON:0002616!3.15e-09!59;UBERON:0001017!1.36e-08!82;UBERON:0002780!1.55e-08!41;UBERON:0001890!1.55e-08!41;UBERON:0006240!1.55e-08!41;UBERON:0003075!1.86e-08!86;UBERON:0007284!1.86e-08!86;UBERON:0002020!2.07e-08!34;UBERON:0003528!2.07e-08!34;UBERON:0005743!2.87e-08!86;UBERON:0004111!3.01e-08!241;UBERON:0000062!4.73e-08!511;UBERON:0000477!5.74e-08!286;UBERON:0002791!1.05e-07!33;UBERON:0002298!1.23e-07!8;UBERON:0000468!1.24e-07!659;UBERON:0002346!1.31e-07!90;UBERON:0001893!2.54e-07!34;UBERON:0000073!3.64e-07!94;UBERON:0001016!3.64e-07!94;UBERON:0002308!4.14e-07!9;UBERON:0000125!4.14e-07!9;UBERON:0000955!4.63e-07!69;UBERON:0006238!4.63e-07!69;UBERON:0002420!6.27e-07!9;UBERON:0007245!6.27e-07!9;UBERON:0010009!6.27e-07!9;UBERON:0010011!6.27e-07!9;UBERON:0000454!6.27e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.84e-12;114!UBERON:0006947;5.01e-09;3!UBERON:0004054;5.01e-09;3!UBERON:0003978;1.69e-08;3!UBERON:0000946;1.69e-08;3!UBERON:0004151;2.39e-08;3!UBERON:0002190;7.28e-08;3!UBERON:0005904;7.82e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.23e-43,114;UBERON:0006947,5.08e-09,3;UBERON:0004054,5.08e-09,3;UBERON:0003978,1.69e-08,3;UBERON:0009751,1.69e-08,3;UBERON:0000946,1.69e-08,3;UBERON:0002523,1.69e-08,3;UBERON:0005983,1.69e-08,3;UBERON:0002165,1.69e-08,3;UBERON:0002062,1.69e-08,3;UBERON:0007280,1.69e-08,3;UBERON:0004151,2.40e-08,3;UBERON:0003103,2.77e-08,68;UBERON:0002190,6.23e-08,3;UBERON:0005904,7.90e-07,4 | |||
|phase1_expression=0.181678379270557,0.642301571672949,3.24195129420734,1.0007329835313,2.68176656656373,0,5.06599756336621,1.89515962028049,3.3954131665979,0.491467873003018,0,0,0,0.123766352960047,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,1.56740831967947,0.971680998056939,1.28787783817093,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0.795285947051099,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,1.26755034821831,0,9.45263850690247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0.432359860250884,0.12624243342638,0,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.857867961948885,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,2.99161459204025,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.564214628977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9896214411693,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,24.7598822969501,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.796991953004279,1.65770349318689,0,0,0,0,0.0898683511473268,0,0,2.86065876347107,0,4.44547960578548,0,0.649376687132959,0,0,0,21.7499872630438,0,0,0,0,0,0,1.77148277162768,0.120596438625408,0,0.110579259931225,0,0.658156191461918,0.10893846351899,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5264501758974,14.0536933334734,0,0,0,0.134802265961354,2.40773294189637,0.702793337176017,0,0,0,16.9671293225238,0,0,2.84339608328196,0,0,0.664653872707185,0,0,0,0,0,0,0,0,7.5132467344073,0,0.290268993867255,0.365446585430928,0.574808199372465,2.32773639572207,0,1.12990370390266,0,0,0.0633107959558787,0,0,3.84215390530835,0,0,0,0.514784993585894,0,0,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0,10.6127312483457,3.43740636017525,6.46085722119133,4.3929380109778,11.5891032996874,40.3940337969789,1.74677028465488,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0.415440338029185,0,0,0.182248669974074,0,3.46745112116472,0.104909176269996,0.316801009558219,0.179287339332845,0,1.42939065274673,231.070097657536,0,0,0,0,0,0,0,0,8.79313402068495,0,0.387848869084652,0.79339561045614,0.171086837884329,0,3.41719720216623,3.30129040709298,7.87054205159671,4.96166021811951,0,0,0,4.89616023032527,10.7796654429761,18.0743890290442,20.0002304732981,0,0,0.366078794705889,0.500763722825999,2.86704597845036,1.22021956690538,0.372578417648301,0,0,0.303298235083296,4.56744533671948,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,1.8460472781668,0.252071696221718,0,0.161475645631851,5.71077681036618,0,0,0,0,0,0,0,3.61009576076435,0,1.56302802246618,0,0,0.147856086217045,0,0.781078098613847,0.826747186004736,0,0,1.09651553371436,1.48863353516788,0,0,0,0,1.82089681270989,1.36597314810779,0.532214220975833,0,0.171488009437418,0.271878931907327,0.131545547125698,0,0.111231401892069,6.90739217084523,0.157115589916002,0,0,0,0,0.285906176706625,0,0.23248285073625,0,0,0.62164849248911,8.1944869005096,1.38251932362818,0,0,0,44.4556402700475,0,0,0,0,0,0,138.549771158209,155.534152387214,0,0.485710993059139,0.233939463462106,2.18845852677505,0,0,0,0.150962843566674,11.0359046094361,0,0.470317296361523,2.69663153929296,0.235676547101626,2.1593931382644,2.37637120261669,0,0,5.82700291475092,0.45120521581504,0,0,0,0,5.11235471772562,0.458729283404541,0.716697915757256,0,0.203974470572744,0,1.0580536810308,0,0.462175628631418,0,0,0,0,0,0,0,0,11.2910260345177,0,0,1.03432995861895,0.639701945702943,0.952257725854961,0.516711278688049,0.558672428662721,0,1.97306190662311,0.404234377916439,3.48346796635138,1.36893320434112,0.0673520530145875,3.01233262649241,1.99596213927608,0,0,0,0.0898252021065869,2.34640942403454,0.366724332548599,0.406896178315738,11.3178651611537,5.23311863336668,0 | |||
|short_description=p2@PDK4 | |||
}} |
Latest revision as of 05:05, 20 September 2015
Short description: | p2@PDK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDK4_5end |
Coexpression cluster: | C538_left_skeletal_heart_seminal_ductus_adipose_mature |
Association with transcript: | 105bp_to_ENST00000473301_5end |
EntrezGene: | PDK4 |
HGNC: | 8812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.98e-15 | 15 |
subcutaneous fat cell | 6.23e-08 | 3 |
adipocyte of omentum tissue | 1.90e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.23e-43 | 114 |
male genital duct | 5.08e-09 | 3 |
internal male genitalia | 5.08e-09 | 3 |
valve | 1.69e-08 | 3 |
cardiac mesenchyme | 1.69e-08 | 3 |
cardial valve | 1.69e-08 | 3 |
tunica intima | 1.69e-08 | 3 |
heart layer | 1.69e-08 | 3 |
endocardium | 1.69e-08 | 3 |
endocardial cushion | 1.69e-08 | 3 |
presumptive endocardium | 1.69e-08 | 3 |
cardiac chamber | 2.40e-08 | 3 |
compound organ | 2.77e-08 | 68 |
subcutaneous adipose tissue | 6.23e-08 | 3 |
duct of male reproductive system | 7.90e-07 | 4 |