FFCP PHASE1:Hg19::chr4:103749179..103749195,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7323 | |EntrezGene=7323 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12476 | |HGNC=12476 | ||
|TSSclassifier=strong | |||
|UniProt=D6RIZ3,D6R933 | |UniProt=D6RIZ3,D6R933 | ||
|association_with_transcript=0bp_to_ENST00000502690,ENST00000514755_5end | |association_with_transcript=0bp_to_ENST00000502690,ENST00000514755_5end | ||
|cluster_id=chr4:103749179..103749195,- | |||
|description=CAGE_peak_13_at_UBE2D3_5end | |description=CAGE_peak_13_at_UBE2D3_5end | ||
|id=chr4:103749179..103749195,- | |id=chr4:103749179..103749195,- | ||
|ontology_enrichment_celltype=CL:0002057!1.17e-22!42;CL:0000860!4.62e-22!45;CL:0000766!8.55e-15!76;CL:0000839!3.37e-12!70;CL:0002009!1.52e-11!65;CL:0002194!2.35e-11!63;CL:0000576!2.35e-11!63;CL:0000040!2.35e-11!63;CL:0000559!2.35e-11!63;CL:0000557!9.88e-11!71;CL:0000763!2.53e-09!112;CL:0000049!2.53e-09!112;CL:0000738!8.22e-09!140;CL:0002031!3.20e-07!124 | |ontology_enrichment_celltype=CL:0002057!1.17e-22!42;CL:0000860!4.62e-22!45;CL:0000766!8.55e-15!76;CL:0000839!3.37e-12!70;CL:0002009!1.52e-11!65;CL:0002194!2.35e-11!63;CL:0000576!2.35e-11!63;CL:0000040!2.35e-11!63;CL:0000559!2.35e-11!63;CL:0000557!9.88e-11!71;CL:0000763!2.53e-09!112;CL:0000049!2.53e-09!112;CL:0000738!8.22e-09!140;CL:0002031!3.20e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.51e-19;33!CL:0002057;3.51e-19;33!CL:0000473;1.95e-12;39!CL:0000234;1.95e-12;39!CL:0000576;1.02e-10;48!CL:0000766;2.87e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.06e-22,42;CL:0002057,1.06e-22,42;CL:0000473,6.14e-18,48;CL:0000234,6.14e-18,48;CL:0000766,7.91e-15,72;CL:0000839,3.41e-12,66;CL:0002009,1.51e-11,61;CL:0002194,2.31e-11,59;CL:0000576,2.31e-11,59;CL:0000040,2.31e-11,59;CL:0000559,2.31e-11,59;CL:0000557,9.78e-11,67;CL:0000763,4.01e-09,108;CL:0000049,4.01e-09,108;CL:0000738,1.54e-08,136;CL:0002031,5.41e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.81e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.56e-11!102;UBERON:0003061!3.56e-11!102;UBERON:0007023!3.09e-10!115;UBERON:0002193!5.63e-09!112;UBERON:0002371!1.45e-08!80;UBERON:0004765!1.34e-07!101;UBERON:0001434!1.34e-07!101;UBERON:0001474!1.81e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!3.56e-11!102;UBERON:0003061!3.56e-11!102;UBERON:0007023!3.09e-10!115;UBERON:0002193!5.63e-09!112;UBERON:0002371!1.45e-08!80;UBERON:0004765!1.34e-07!101;UBERON:0001434!1.34e-07!101;UBERON:0001474!1.81e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.82e-11,98;UBERON:0003061,3.82e-11,98;UBERON:0007023,5.84e-10,114;UBERON:0002193,6.86e-09,108;UBERON:0002371,1.55e-08,76;UBERON:0001474,2.17e-07,82;UBERON:0001434,6.56e-07,100;UBERON:0004765,7.91e-07,90 | |||
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| ||
|short_description=p13@UBE2D3 | |short_description=p13@UBE2D3 | ||
}} | }} |
Latest revision as of 05:08, 20 September 2015
Short description: | p13@UBE2D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_UBE2D3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000502690, ENST00000514755_5end |
EntrezGene: | UBE2D3 |
HGNC: | 12476 |
UniProt: | D6RIZ3D6R933 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.06e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-22 | 42 |
defensive cell | 6.14e-18 | 48 |
phagocyte | 6.14e-18 | 48 |
myeloid leukocyte | 7.91e-15 | 72 |
myeloid lineage restricted progenitor cell | 3.41e-12 | 66 |
macrophage dendritic cell progenitor | 1.51e-11 | 61 |
monopoietic cell | 2.31e-11 | 59 |
monocyte | 2.31e-11 | 59 |
monoblast | 2.31e-11 | 59 |
promonocyte | 2.31e-11 | 59 |
granulocyte monocyte progenitor cell | 9.78e-11 | 67 |
myeloid cell | 4.01e-09 | 108 |
common myeloid progenitor | 4.01e-09 | 108 |
leukocyte | 1.54e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 5.41e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.82e-11 | 98 |
blood island | 3.82e-11 | 98 |
adult organism | 5.84e-10 | 114 |
hemolymphoid system | 6.86e-09 | 108 |
bone marrow | 1.55e-08 | 76 |
bone element | 2.17e-07 | 82 |
skeletal system | 6.56e-07 | 100 |
skeletal element | 7.91e-07 | 90 |