FFCP PHASE1:Hg19::chr19:5775165..5775199,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257062 | |EntrezGene=257062 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28598 | |HGNC=28598 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_ENST00000448307_5end | |association_with_transcript=-53bp_to_ENST00000448307_5end | ||
|cluster_id=chr19:5775165..5775199,+ | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_4_at_TMEM146_5end | |description=CAGE_peak_4_at_TMEM146_5end | ||
|id=chr19:5775165..5775199,+ | |id=chr19:5775165..5775199,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.18e-12;29!UBERON:0007297;1.56e-12;2!UBERON:0001041;2.72e-07;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@TMEM146 | |short_description=p4@TMEM146 | ||
}} | }} |
Latest revision as of 05:13, 20 September 2015
Short description: | p4@TMEM146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM146_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | -53bp_to_ENST00000448307_5end |
EntrezGene: | TMEM146 |
HGNC: | 28598 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 1.91e-44 | 2 |
epididymis | 1.07e-23 | 1 |
lower lobe of right lung | 1.67e-23 | 1 |
right lung lobe | 1.67e-23 | 1 |
lower lobe of lung | 1.67e-23 | 1 |
lobe of lung | 1.67e-23 | 1 |
right lung | 1.67e-23 | 1 |
open tracheal system trachea | 1.65e-12 | 2 |
locus ceruleus | 3.62e-12 | 2 |
brainstem nucleus | 3.62e-12 | 2 |
hindbrain nucleus | 3.62e-12 | 2 |
thoracic cavity element | 7.56e-11 | 34 |
thoracic cavity | 7.56e-11 | 34 |
thoracic segment organ | 1.50e-10 | 35 |
respiratory primordium | 9.57e-10 | 38 |
endoderm of foregut | 9.57e-10 | 38 |
neck | 9.65e-10 | 10 |
lung | 9.98e-10 | 22 |
respiratory tube | 9.98e-10 | 22 |
respiration organ | 9.98e-10 | 22 |
pair of lungs | 9.98e-10 | 22 |
lung primordium | 9.98e-10 | 22 |
lung bud | 9.98e-10 | 22 |
adult organism | 2.41e-09 | 114 |
male genital duct | 8.31e-09 | 3 |
internal male genitalia | 8.31e-09 | 3 |
pons | 1.51e-08 | 3 |
thoracic segment of trunk | 3.28e-07 | 52 |
respiratory tract | 5.92e-07 | 54 |
duct of male reproductive system | 6.50e-07 | 4 |