FFCP PHASE1:Hg19::chr17:39659057..39659078,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENST00000464634_5end | |association_with_transcript=-45bp_to_ENST00000464634_5end | ||
|cluster_id=chr17:39659057..39659078,- | |||
|coexpression_cluster_id=C263 | |coexpression_cluster_id=C263 | ||
|description=CAGE_peak_3_at_KRT13_5end | |description=CAGE_peak_3_at_KRT13_5end | ||
|id=chr17:39659057..39659078,- | |id=chr17:39659057..39659078,- | ||
|ontology_enrichment_celltype=CL:0000244!2.71e-09!4;CL:0000731!2.71e-09!4 | |ontology_enrichment_celltype=CL:0000244!2.71e-09!4;CL:0000731!2.71e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.39e-11;1!CL:0002625;1.39e-11;1!CL:0000216;1.39e-11;1!CL:0000244;3.41e-11;4!CL:0000731;3.41e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.19e-11,1;CL:0002625,1.19e-11,1;CL:0000216,1.19e-11,1;CL:0000244,2.92e-11,4;CL:0000731,2.92e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.93e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!5.32e-17!8;UBERON:0003135!1.87e-16!11;UBERON:0003101!1.57e-12!22;UBERON:0000079!1.57e-12!22;UBERON:0005156!1.12e-09!59;UBERON:0000990!1.12e-09!59;UBERON:0001042!1.51e-09!10;UBERON:0009145!1.51e-09!10;UBERON:0001008!2.05e-09!45;UBERON:0000974!3.64e-09!10;UBERON:0003133!3.76e-09!48;UBERON:0003127!5.21e-09!2;UBERON:0000341!5.86e-09!2;UBERON:0006562!1.19e-08!11;UBERON:0006554!4.90e-08!44;UBERON:0004176!1.10e-07!22;UBERON:0000365!1.64e-07!5 | |ontology_enrichment_uberon=UBERON:0000473!5.32e-17!8;UBERON:0003135!1.87e-16!11;UBERON:0003101!1.57e-12!22;UBERON:0000079!1.57e-12!22;UBERON:0005156!1.12e-09!59;UBERON:0000990!1.12e-09!59;UBERON:0001042!1.51e-09!10;UBERON:0009145!1.51e-09!10;UBERON:0001008!2.05e-09!45;UBERON:0000974!3.64e-09!10;UBERON:0003133!3.76e-09!48;UBERON:0003127!5.21e-09!2;UBERON:0000341!5.86e-09!2;UBERON:0006562!1.19e-08!11;UBERON:0006554!4.90e-08!44;UBERON:0004176!1.10e-07!22;UBERON:0000365!1.64e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.33e-21;2!UBERON:0001723;3.99e-15;3!UBERON:0001033;3.99e-15;3!UBERON:0002372;5.05e-12;1!UBERON:0001961;5.05e-12;1!UBERON:0001744;5.05e-12;1!UBERON:0001042;5.05e-12;1!UBERON:0001735;5.05e-12;1!UBERON:0005795;5.62e-12;1!UBERON:0006834;1.39e-11;1!UBERON:0001136;1.39e-11;1!UBERON:0001343;1.39e-11;1!UBERON:0004910;1.39e-11;1!UBERON:0004813;1.39e-11;1!UBERON:0000365;3.90e-09;5!UBERON:0000002;3.77e-08;6!UBERON:0001560;3.77e-08;6!UBERON:0005910;9.33e-08;6!UBERON:0003126;7.98e-07;7!UBERON:0001005;7.98e-07;7!UBERON:0000341;9.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.56e-21,2;UBERON:0001723,3.99e-15,3;UBERON:0001033,3.99e-15,3;UBERON:0010056,3.99e-15,3;UBERON:0002372,5.05e-12,1;UBERON:0001961,5.05e-12,1;UBERON:0001744,5.05e-12,1;UBERON:0001735,5.05e-12,1;UBERON:0001136,1.19e-11,1;UBERON:0001343,1.19e-11,1;UBERON:0004910,1.19e-11,1;UBERON:0005154,1.19e-11,1;UBERON:0005295,1.19e-11,1;UBERON:0004813,1.19e-11,1;UBERON:0005297,1.19e-11,1;UBERON:0005294,1.19e-11,1;UBERON:0010141,1.19e-11,1;UBERON:0005891,1.19e-11,1;UBERON:0006834,1.81e-11,1;UBERON:0001042,3.75e-10,10;UBERON:0009145,3.75e-10,10;UBERON:0006562,2.82e-09,11;UBERON:0000365,3.44e-09,5;UBERON:0000002,3.77e-08,6;UBERON:0001560,3.77e-08,6;UBERON:0005795,6.31e-08,22;UBERON:0005910,8.41e-08,6;UBERON:0000072,1.21e-07,47;UBERON:0003126,8.34e-07,7;UBERON:0001005,8.34e-07,7;UBERON:0000341,9.96e-07,2 | |||
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| ||
|short_description=p3@KRT13 | |short_description=p3@KRT13 | ||
}} | }} |
Latest revision as of 05:25, 20 September 2015
Short description: | p3@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KRT13_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | -45bp_to_ENST00000464634_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.19e-11 | 1 |
seminiferous tubule epithelial cell | 1.19e-11 | 1 |
Sertoli cell | 1.19e-11 | 1 |
transitional epithelial cell | 2.92e-11 | 4 |
urothelial cell | 2.92e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.56e-21 | 2 |
tongue | 3.99e-15 | 3 |
gustatory system | 3.99e-15 | 3 |
future tongue | 3.99e-15 | 3 |
tonsil | 5.05e-12 | 1 |
mucosa-associated lymphoid tissue | 5.05e-12 | 1 |
lymphoid tissue | 5.05e-12 | 1 |
tonsillar ring | 5.05e-12 | 1 |
mesothelium | 1.19e-11 | 1 |
seminiferous tubule of testis | 1.19e-11 | 1 |
epithelium of male gonad | 1.19e-11 | 1 |
epithelial cord | 1.19e-11 | 1 |
sex cord | 1.19e-11 | 1 |
seminiferous tubule epithelium | 1.19e-11 | 1 |
testis sex cord | 1.19e-11 | 1 |
genital ridge | 1.19e-11 | 1 |
primitive sex cord of indifferent gonad | 1.19e-11 | 1 |
coelomic epithelium | 1.19e-11 | 1 |
uterus or analog | 1.81e-11 | 1 |
chordate pharynx | 3.75e-10 | 10 |
pharyngeal region of foregut | 3.75e-10 | 10 |
pharynx | 2.82e-09 | 11 |
urothelium | 3.44e-09 | 5 |
uterine cervix | 3.77e-08 | 6 |
neck of organ | 3.77e-08 | 6 |
embryonic uterus | 6.31e-08 | 22 |
transitional epithelium | 8.41e-08 | 6 |
segment of respiratory tract | 1.21e-07 | 47 |
trachea | 8.34e-07 | 7 |
respiratory airway | 8.34e-07 | 7 |
throat | 9.96e-07 | 2 |