FFCP PHASE1:Hg19::chr17:39659118..39659129,-: Difference between revisions
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|id=chr17:39659118..39659129,-
|short_description=p10@KRT13
|description=CAGE_peak_10_at_KRT13_5end
|association_with_transcript=-106bp_to_ENST00000464634_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-106bp_to_ENST00000464634_5end | |||
|cluster_id=chr17:39659118..39659129,- | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_10_at_KRT13_5end | |||
|id=chr17:39659118..39659129,- | |||
|ontology_enrichment_celltype=CL:0000039!6.35e-09!7;CL:0000586!6.35e-09!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.88e-19;1!UBERON:0009117;3.43e-08;10!UBERON:0005564;3.43e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!7.92e-21!8;UBERON:0001042!2.08e-16!10;UBERON:0009145!2.08e-16!10;UBERON:0003135!4.12e-15!11;UBERON:0006562!6.63e-15!11;UBERON:0003127!3.54e-14!2;UBERON:0003101!2.23e-10!22;UBERON:0000079!2.23e-10!22;UBERON:0001723!6.87e-10!3;UBERON:0001033!6.87e-10!3;UBERON:0010056!6.87e-10!3;UBERON:0001557!1.50e-08!19;UBERON:0002372!3.34e-08!1;UBERON:0001961!3.34e-08!1;UBERON:0001744!3.34e-08!1;UBERON:0001735!3.34e-08!1;UBERON:0002323!3.60e-08!46;UBERON:0002426!3.83e-08!1;UBERON:0003831!3.83e-08!1;UBERON:0003898!3.83e-08!1;UBERON:0004830!3.83e-08!1;UBERON:0001774!3.83e-08!1;UBERON:0003830!3.83e-08!1;UBERON:0005175!3.83e-08!1;UBERON:0003897!3.83e-08!1;UBERON:0001103!3.83e-08!1;UBERON:0010084!3.83e-08!1;UBERON:0006834!4.40e-08!1;UBERON:0003133!6.69e-08!48;UBERON:0000991!8.08e-08!21;UBERON:0009196!8.08e-08!21;UBERON:0009117!8.08e-08!21;UBERON:0005564!8.08e-08!21;UBERON:0005156!8.36e-08!59;UBERON:0000990!8.36e-08!59;UBERON:0004458!1.33e-07!49;UBERON:0004176!1.88e-07!22;UBERON:0002370!2.28e-07!4;UBERON:0005058!2.28e-07!4;UBERON:0009113!2.28e-07!4;UBERON:0003295!2.28e-07!4;UBERON:0005562!2.28e-07!4;UBERON:0008814!3.49e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.56e-19;1!UBERON:0005795;3.56e-19;1!UBERON:0001961;3.56e-19;1!UBERON:0001744;3.56e-19;1!UBERON:0001042;3.56e-19;1!UBERON:0001735;3.56e-19;1!UBERON:0000002;4.39e-13;6!UBERON:0001560;4.39e-13;6!UBERON:0000341;1.72e-10;2!UBERON:0006562;2.85e-10;2!UBERON:0000473;5.18e-10;8!UBERON:0003135;1.59e-07;11!UBERON:0001043;2.32e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,5.62e-19,1;UBERON:0001961,5.62e-19,1;UBERON:0001744,5.62e-19,1;UBERON:0001735,5.62e-19,1;UBERON:0000002,4.81e-13,6;UBERON:0001560,4.81e-13,6;UBERON:0000341,1.89e-10,2;UBERON:0000473,4.62e-10,8;UBERON:0005795,5.39e-08,22;UBERON:0003135,1.46e-07,11;UBERON:0001043,2.32e-07,3;UBERON:0009143,2.32e-07,3 | |||
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|short_description=p10@KRT13 | |||
}} | }} |
Latest revision as of 05:26, 20 September 2015
Short description: | p10@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_KRT13_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | -106bp_to_ENST00000464634_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 5.62e-19 | 1 |
mucosa-associated lymphoid tissue | 5.62e-19 | 1 |
lymphoid tissue | 5.62e-19 | 1 |
tonsillar ring | 5.62e-19 | 1 |
uterine cervix | 4.81e-13 | 6 |
neck of organ | 4.81e-13 | 6 |
throat | 1.89e-10 | 2 |
testis | 4.62e-10 | 8 |
embryonic uterus | 5.39e-08 | 22 |
male reproductive organ | 1.46e-07 | 11 |
esophagus | 2.32e-07 | 3 |
esophageal region | 2.32e-07 | 3 |