FFCP PHASE1:Hg19::chr3:127634371..127634378,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=166348 | |EntrezGene=166348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25731 | |HGNC=25731 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCZ4 | |UniProt=B5MCZ4 | ||
|association_with_transcript=53bp_to_ENST00000407609,ENST00000476626,uc003ejy.3,uc010hsq.2_5end | |association_with_transcript=53bp_to_ENST00000407609,ENST00000476626,uc003ejy.3,uc010hsq.2_5end | ||
|cluster_id=chr3:127634371..127634378,+ | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_12_at_KBTBD12_5end | |description=CAGE_peak_12_at_KBTBD12_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.22e-26;1!UBERON:0008814;1.00e-13;2!UBERON:0010056;1.00e-13;2!UBERON:0005062;1.64e-07;4!UBERON:0007284;1.64e-07;4 | |ontology_enrichment_development_v019=UBERON:0004140;5.22e-26;1!UBERON:0008814;1.00e-13;2!UBERON:0010056;1.00e-13;2!UBERON:0005062;1.64e-07;4!UBERON:0007284;1.64e-07;4 | ||
|ontology_enrichment_disease=DOID:114!8.40e-19!2;DOID:178!4.44e-10!1;DOID:326!4.44e-10!1;DOID:3978!4.44e-10!1;DOID:3394!4.44e-10!1;DOID:5844!4.44e-10!1;DOID:1287!7.24e-10!4 | |ontology_enrichment_disease=DOID:114!8.40e-19!2;DOID:178!4.44e-10!1;DOID:326!4.44e-10!1;DOID:3978!4.44e-10!1;DOID:3394!4.44e-10!1;DOID:5844!4.44e-10!1;DOID:1287!7.24e-10!4 | ||
|ontology_enrichment_disease_v019=DOID:114;1.00e-13;2!DOID:1287;1.64e-07;4 | |ontology_enrichment_disease_v019=DOID:114;1.00e-13;2!DOID:1287;1.64e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,7.30e-14,2;DOID:1287,1.40e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-16!115;UBERON:0001723!5.85e-13!3;UBERON:0001033!5.85e-13!3;UBERON:0010056!5.85e-13!3;UBERON:0003978!1.19e-12!3;UBERON:0009751!1.19e-12!3;UBERON:0000946!1.19e-12!3;UBERON:0002523!1.19e-12!3;UBERON:0005983!1.19e-12!3;UBERON:0002165!1.19e-12!3;UBERON:0002062!1.19e-12!3;UBERON:0007280!1.19e-12!3;UBERON:0006947!1.59e-12!3;UBERON:0004054!1.59e-12!3;UBERON:0007100!2.12e-11!27;UBERON:0003103!2.98e-11!69;UBERON:0002426!2.16e-10!1;UBERON:0003831!2.16e-10!1;UBERON:0003898!2.16e-10!1;UBERON:0004830!2.16e-10!1;UBERON:0001774!2.16e-10!1;UBERON:0003830!2.16e-10!1;UBERON:0005175!2.16e-10!1;UBERON:0003897!2.16e-10!1;UBERON:0001103!2.16e-10!1;UBERON:0010084!2.16e-10!1;UBERON:0002146!2.59e-10!1;UBERON:0005623!2.59e-10!1;UBERON:0000989!3.71e-10!1;UBERON:0008811!3.71e-10!1;UBERON:0006258!3.71e-10!1;UBERON:0005876!3.71e-10!1;UBERON:0004874!3.71e-10!1;UBERON:0007029!4.06e-10!1;UBERON:0001000!4.85e-10!1;UBERON:0005352!4.85e-10!1;UBERON:0001301!5.30e-10!1;UBERON:0002135!6.33e-10!1;UBERON:0005904!1.28e-09!4;UBERON:0003135!1.11e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!1.29e-16!115;UBERON:0001723!5.85e-13!3;UBERON:0001033!5.85e-13!3;UBERON:0010056!5.85e-13!3;UBERON:0003978!1.19e-12!3;UBERON:0009751!1.19e-12!3;UBERON:0000946!1.19e-12!3;UBERON:0002523!1.19e-12!3;UBERON:0005983!1.19e-12!3;UBERON:0002165!1.19e-12!3;UBERON:0002062!1.19e-12!3;UBERON:0007280!1.19e-12!3;UBERON:0006947!1.59e-12!3;UBERON:0004054!1.59e-12!3;UBERON:0007100!2.12e-11!27;UBERON:0003103!2.98e-11!69;UBERON:0002426!2.16e-10!1;UBERON:0003831!2.16e-10!1;UBERON:0003898!2.16e-10!1;UBERON:0004830!2.16e-10!1;UBERON:0001774!2.16e-10!1;UBERON:0003830!2.16e-10!1;UBERON:0005175!2.16e-10!1;UBERON:0003897!2.16e-10!1;UBERON:0001103!2.16e-10!1;UBERON:0010084!2.16e-10!1;UBERON:0002146!2.59e-10!1;UBERON:0005623!2.59e-10!1;UBERON:0000989!3.71e-10!1;UBERON:0008811!3.71e-10!1;UBERON:0006258!3.71e-10!1;UBERON:0005876!3.71e-10!1;UBERON:0004874!3.71e-10!1;UBERON:0007029!4.06e-10!1;UBERON:0001000!4.85e-10!1;UBERON:0005352!4.85e-10!1;UBERON:0001301!5.30e-10!1;UBERON:0002135!6.33e-10!1;UBERON:0005904!1.28e-09!4;UBERON:0003135!1.11e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;7.68e-34;3!UBERON:0001033;7.68e-34;3!UBERON:0002146;5.22e-26;1!UBERON:0002426;5.22e-26;1!UBERON:0003831;5.22e-26;1!UBERON:0003898;5.22e-26;1!UBERON:0004830;5.22e-26;1!UBERON:0005623;5.22e-26;1!UBERON:0003830;5.22e-26;1!UBERON:0005175;5.22e-26;1!UBERON:0001774;5.22e-26;1!UBERON:0001103;5.22e-26;1!UBERON:0007100;2.68e-16;25!UBERON:0000341;1.00e-13;2!UBERON:0005090;1.00e-13;2!UBERON:0001630;1.00e-13;2!UBERON:0003978;1.35e-09;3!UBERON:0000946;1.35e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0001723;7.68e-34;3!UBERON:0001033;7.68e-34;3!UBERON:0002146;5.22e-26;1!UBERON:0002426;5.22e-26;1!UBERON:0003831;5.22e-26;1!UBERON:0003898;5.22e-26;1!UBERON:0004830;5.22e-26;1!UBERON:0005623;5.22e-26;1!UBERON:0003830;5.22e-26;1!UBERON:0005175;5.22e-26;1!UBERON:0001774;5.22e-26;1!UBERON:0001103;5.22e-26;1!UBERON:0007100;2.68e-16;25!UBERON:0000341;1.00e-13;2!UBERON:0005090;1.00e-13;2!UBERON:0001630;1.00e-13;2!UBERON:0003978;1.35e-09;3!UBERON:0000946;1.35e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,9.10e-34,3;UBERON:0001033,9.10e-34,3;UBERON:0010056,9.10e-34,3;UBERON:0002426,4.61e-26,1;UBERON:0003831,4.61e-26,1;UBERON:0003898,4.61e-26,1;UBERON:0004830,4.61e-26,1;UBERON:0003830,4.61e-26,1;UBERON:0005175,4.61e-26,1;UBERON:0001774,4.61e-26,1;UBERON:0001103,4.61e-26,1;UBERON:0010084,4.61e-26,1;UBERON:0002146,7.62e-26,1;UBERON:0005623,7.62e-26,1;UBERON:0007100,3.82e-15,27;UBERON:0005090,9.40e-14,2;UBERON:0001630,9.40e-14,2;UBERON:0000341,1.07e-13,2;UBERON:0003103,3.14e-13,68;UBERON:0001042,6.94e-11,10;UBERON:0009145,6.94e-11,10;UBERON:0006562,5.54e-10,11;UBERON:0003978,1.54e-09,3;UBERON:0009751,1.54e-09,3;UBERON:0000946,1.54e-09,3;UBERON:0002523,1.54e-09,3;UBERON:0005983,1.54e-09,3;UBERON:0002165,1.54e-09,3;UBERON:0002062,1.54e-09,3;UBERON:0007280,1.54e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.3749625440701,0,0.399358000997982,1.71690419254628,1.78537165953498,1.00775208730089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923965261706223,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49263787330687,0,0,0,0,0,0,1.30630048738177,1.71116650542641,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.3749625440701,0,0.399358000997982,1.71690419254628,1.78537165953498,1.00775208730089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923965261706223,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49263787330687,0,0,0,0,0,0,1.30630048738177,1.71116650542641,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@KBTBD12 | |short_description=p12@KBTBD12 | ||
}} | }} |
Latest revision as of 06:12, 20 September 2015
Short description: | p12@KBTBD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KBTBD12_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 53bp_to_ENST00000407609, ENST00000476626, uc003ejy.3, uc010hsq.2_5end |
EntrezGene: | KBTBD12 |
HGNC: | 25731 |
UniProt: | B5MCZ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 9.10e-34 | 3 |
gustatory system | 9.10e-34 | 3 |
future tongue | 9.10e-34 | 3 |
chest muscle | 4.61e-26 | 1 |
respiratory system muscle | 4.61e-26 | 1 |
skeletal muscle of trunk | 4.61e-26 | 1 |
respiratory system skeletal muscle | 4.61e-26 | 1 |
thoracic segment muscle | 4.61e-26 | 1 |
chest organ | 4.61e-26 | 1 |
muscle of trunk | 4.61e-26 | 1 |
diaphragm | 4.61e-26 | 1 |
future diaphragm | 4.61e-26 | 1 |
pulmonary valve | 7.62e-26 | 1 |
semi-lunar valve | 7.62e-26 | 1 |
primary circulatory organ | 3.82e-15 | 27 |
muscle structure | 9.40e-14 | 2 |
muscle organ | 9.40e-14 | 2 |
throat | 1.07e-13 | 2 |
compound organ | 3.14e-13 | 68 |
chordate pharynx | 6.94e-11 | 10 |
pharyngeal region of foregut | 6.94e-11 | 10 |
pharynx | 5.54e-10 | 11 |
valve | 1.54e-09 | 3 |
cardiac mesenchyme | 1.54e-09 | 3 |
cardial valve | 1.54e-09 | 3 |
tunica intima | 1.54e-09 | 3 |
heart layer | 1.54e-09 | 3 |
endocardium | 1.54e-09 | 3 |
endocardial cushion | 1.54e-09 | 3 |
presumptive endocardium | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.30e-14 | 2 |
cardiovascular system disease | 1.40e-07 | 4 |