FFCP PHASE1:Hg19::chr1:207103754..207103765,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5284 | |EntrezGene=5284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8968 | |HGNC=8968 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-89bp_to_AY178835_5end | |association_with_transcript=-89bp_to_AY178835_5end | ||
|cluster_id=chr1:207103754..207103765,- | |||
|coexpression_cluster_id=C995 | |coexpression_cluster_id=C995 | ||
|description=CAGE_peak_12_at_PIGR_5end | |description=CAGE_peak_12_at_PIGR_5end | ||
|id=chr1:207103754..207103765,- | |id=chr1:207103754..207103765,- | ||
|ontology_enrichment_celltype=CL:0000945!1.65e-34!24;CL:0000826!1.65e-34!24;CL:0000236!5.63e-27!14;CL:0000838!6.01e-16!52;CL:0000542!1.43e-15!53;CL:0000051!1.43e-15!53;CL:0002087!2.12e-15!119;CL:0002031!2.90e-13!124;CL:0000738!3.66e-12!140;CL:0000037!8.84e-09!172;CL:0000566!8.84e-09!172;CL:0002032!1.59e-08!165;CL:0000837!1.59e-08!165;CL:0000988!5.63e-08!182 | |ontology_enrichment_celltype=CL:0000945!1.65e-34!24;CL:0000826!1.65e-34!24;CL:0000236!5.63e-27!14;CL:0000838!6.01e-16!52;CL:0000542!1.43e-15!53;CL:0000051!1.43e-15!53;CL:0002087!2.12e-15!119;CL:0002031!2.90e-13!124;CL:0000738!3.66e-12!140;CL:0000037!8.84e-09!172;CL:0000566!8.84e-09!172;CL:0002032!1.59e-08!165;CL:0000837!1.59e-08!165;CL:0000988!5.63e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.70e-55;24!CL:0000236;2.40e-45;13!CL:0000542;6.27e-19;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.85e-55,24;CL:0000826,4.85e-55,24;CL:0000236,4.58e-42,14;CL:0000838,3.77e-25,52;CL:0000542,1.15e-24,53;CL:0000051,1.15e-24,53;CL:0002087,6.53e-11,115;CL:0002031,1.98e-10,120;CL:0000738,4.03e-09,136;CL:0002032,1.37e-07,161;CL:0000837,1.37e-07,161;CL:0000037,3.06e-07,168;CL:0000988,7.86e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;6.27e-19;53!UBERON:0006298;1.12e-17;1!UBERON:0008801;1.12e-17;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.19e-10!115;UBERON:0001829!3.38e-09!2 | |ontology_enrichment_uberon=UBERON:0007023!3.19e-10!115;UBERON:0001829!3.38e-09!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.64e-33;2!UBERON:0001044;4.33e-25;6!UBERON:0003293;4.33e-25;6!UBERON:0003294;4.33e-25;6!UBERON:0010047;4.33e-25;6!UBERON:0003408;4.33e-25;6!UBERON:0000167;4.33e-25;6!UBERON:0001831;1.12e-17;1!UBERON:0001736;1.12e-17;1!UBERON:0001567;1.12e-17;1!UBERON:0001041;3.79e-11;14!UBERON:0004089;1.64e-09;2!UBERON:0000161;2.28e-08;19!UBERON:0000166;2.28e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.64e-33,2;UBERON:0001044,4.16e-25,6;UBERON:0003293,4.16e-25,6;UBERON:0003294,4.16e-25,6;UBERON:0010047,4.16e-25,6;UBERON:0000167,4.16e-25,6;UBERON:0001736,7.37e-18,1;UBERON:0006298,7.37e-18,1;UBERON:0001831,1.70e-17,1;UBERON:0001567,1.70e-17,1;UBERON:0008801,1.70e-17,1;UBERON:0003408,2.34e-15,10;UBERON:0004089,2.02e-09,2;UBERON:0000166,2.64e-07,22 | |||
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| ||
|short_description=p12@PIGR | |short_description=p12@PIGR | ||
}} | }} |
Latest revision as of 06:39, 20 September 2015
Short description: | p12@PIGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PIGR_5end |
Coexpression cluster: | C995_B_plasma_lymphoma_xeroderma_acute_Burkitt_b |
Association with transcript: | -89bp_to_AY178835_5end |
EntrezGene: | PIGR |
HGNC: | 8968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.85e-55 | 24 |
pro-B cell | 4.85e-55 | 24 |
B cell | 4.58e-42 | 14 |
lymphoid lineage restricted progenitor cell | 3.77e-25 | 52 |
lymphocyte | 1.15e-24 | 53 |
common lymphoid progenitor | 1.15e-24 | 53 |
nongranular leukocyte | 6.53e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.98e-10 | 120 |
leukocyte | 4.03e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.37e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-07 | 161 |
hematopoietic stem cell | 3.06e-07 | 168 |
hematopoietic cell | 7.86e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.64e-33 | 2 |
saliva-secreting gland | 4.16e-25 | 6 |
gland of oral region | 4.16e-25 | 6 |
gland of foregut | 4.16e-25 | 6 |
oral gland | 4.16e-25 | 6 |
oral cavity | 4.16e-25 | 6 |
submandibular gland | 7.37e-18 | 1 |
submandibular gland primordium | 7.37e-18 | 1 |
parotid gland | 1.70e-17 | 1 |
cheek | 1.70e-17 | 1 |
parotid gland primordium | 1.70e-17 | 1 |
gland of gut | 2.34e-15 | 10 |
midface | 2.02e-09 | 2 |
oral opening | 2.64e-07 | 22 |