FFCP PHASE1:Hg19::chr18:6774000..6774019,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79822 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25509 | |||
|TSSclassifier=strong | |||
|UniProt=E9PL26 | |||
|association_with_transcript=0bp_to_ENST00000532723_5end | |||
|cluster_id=chr18:6774000..6774019,+ | |||
|description=CAGE_peak_4_at_ARHGAP28_5end | |||
|id=chr18:6774000..6774019,+ | |||
|ontology_enrichment_celltype=CL:0000071!5.44e-13!18;CL:0002546!5.44e-13!18;CL:0002543!5.15e-12!6;CL:0002139!1.51e-10!24;CL:0000115!1.04e-08!35;CL:0002078!5.19e-07!44;CL:0002618!6.18e-07!3;CL:1000413!6.21e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002543;7.63e-22;6!CL:0000071;4.81e-17;18!CL:0002618;1.52e-16;3!CL:0002139;1.76e-12;24!CL:0000115;2.22e-10;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,8.15e-22,6;CL:0000071,5.87e-17,18;CL:0002546,5.87e-17,18;CL:0002618,1.87e-16,3;CL:0000115,1.88e-12,36;CL:0002139,2.03e-12,24;CL:0002078,1.34e-09,45;CL:0000213,4.68e-07,58;CL:0000215,4.68e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;4.81e-17;18!UBERON:0003124;6.23e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.65e-19!115;UBERON:0001986!5.44e-13!18;UBERON:0004638!5.44e-13!18;UBERON:0004852!5.44e-13!18;UBERON:0000487!4.90e-10!22;UBERON:0006914!7.72e-10!25;UBERON:0001638!1.19e-07!9;UBERON:0003920!1.19e-07!9;UBERON:0004582!1.19e-07!9;UBERON:0003135!5.37e-07!11;UBERON:0003915!6.21e-07!9;UBERON:0004700!6.21e-07!9;UBERON:0001917!6.21e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.81e-17;18!UBERON:0001986;4.81e-17;18!UBERON:0004852;4.81e-17;18!UBERON:0000922;6.92e-16;49!UBERON:0001638;1.70e-14;9!UBERON:0003920;1.70e-14;9!UBERON:0004582;1.70e-14;9!UBERON:0000487;1.00e-13;22!UBERON:0006914;6.21e-12;25!UBERON:0002066;3.99e-10;5!UBERON:0000160;8.44e-10;17!UBERON:0002108;9.87e-10;4!UBERON:0005409;1.53e-07;22!UBERON:0000490;1.63e-07;33!UBERON:0007029;7.56e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.87e-17,18;UBERON:0001986,5.87e-17,18;UBERON:0004852,5.87e-17,18;UBERON:0001638,1.78e-14,9;UBERON:0003920,1.78e-14,9;UBERON:0004582,1.78e-14,9;UBERON:0000487,1.18e-13,22;UBERON:0006914,7.13e-12,25;UBERON:0002066,4.52e-10,5;UBERON:0000160,7.18e-10,17;UBERON:0002108,9.15e-10,4;UBERON:0007500,7.16e-07,59;UBERON:0001981,7.16e-07,59;UBERON:0004537,7.16e-07,59;UBERON:0006965,7.16e-07,59;UBERON:0007029,8.21e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,1.13061588384802,0,1.10047216776027,1.04497483268405,0.516833518338658,0,0,0,0,0,0,0.81014194788176,4.55428614248807,3.36794058939255,3.15312145353302,1.53316637465883,0.949265659568129,6.59526278149466,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.232387885739037,1.0366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,5.90524363699719,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714889968290738,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,2.80690690932781,0,0,0,0,0,0,0,0,0,0,0,5.46117361732928,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33061483573184,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07730361905316,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,1.83309043480088,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0.789168805698781,3.62972148145992,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0.343972064943233,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0.209205692624666,0.101998217636322,0.288950589901519,0,0,0,0,0,1.11712960508902,0.916641696046735,0,0.399358000997982,0,0,2.35142153703542,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,4.3343139014559,3.46200281690987,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0,0,0,0,0.106787412567695,4.24451623769098,0.414239055347196,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,10.1120701985408,0,0,0.0679697329768317,0.0657727735628491,0,0,0.470958557103084,0.157115589916002,20.1795957585928,3.65263488203798,0,0,0.714765441766563,0,27.0842521107732,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0.102662806856247,5.799072156691,5.34282092365053,0,0,0,0,0,0,1.46630900405095,2.18559560503957,0,0.980593287015622,0,0,0,2.5359343655004,0,0,0.257831551894309,0,0,0,0,0,0.917458566809082,0.143339583151451,0.157771562193185,0,0,3.7031878836078,0,0,0,0,0,0,0.509944148709909,0,0,0,0.530450887527676,0.267964130156178,0,0,0.213233981900981,4.76128862927481,0.193766729508018,0.620747142958579,0,0.190941474834495,3.84022659020617,0.217716747896961,1.71116650542641,0.336760265072938,0.358611026963382,0.99798106963804,0,0,0,0,0,0.244482888365733,3.25516942652591,0,0,0 | |||
|short_description=p4@ARHGAP28 | |||
}} |
Latest revision as of 06:58, 20 September 2015
Short description: | p4@ARHGAP28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGAP28_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000532723_5end |
EntrezGene: | ARHGAP28 |
HGNC: | 25509 |
UniProt: | E9PL26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 8.15e-22 | 6 |
blood vessel endothelial cell | 5.87e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.87e-17 | 18 |
endothelial cell of umbilical vein | 1.87e-16 | 3 |
endothelial cell | 1.88e-12 | 36 |
endothelial cell of vascular tree | 2.03e-12 | 24 |
meso-epithelial cell | 1.34e-09 | 45 |
lining cell | 4.68e-07 | 58 |
barrier cell | 4.68e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.87e-17 | 18 |
endothelium | 5.87e-17 | 18 |
cardiovascular system endothelium | 5.87e-17 | 18 |
vein | 1.78e-14 | 9 |
venous blood vessel | 1.78e-14 | 9 |
venous system | 1.78e-14 | 9 |
simple squamous epithelium | 1.18e-13 | 22 |
squamous epithelium | 7.13e-12 | 25 |
umbilical vein | 4.52e-10 | 5 |
intestine | 7.18e-10 | 17 |
small intestine | 9.15e-10 | 4 |
epithelial tube open at both ends | 7.16e-07 | 59 |
blood vessel | 7.16e-07 | 59 |
blood vasculature | 7.16e-07 | 59 |
vascular cord | 7.16e-07 | 59 |
surface | 8.21e-07 | 1 |