FFCP PHASE1:Hg19::chr22:38506619..38506678,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=80115 | |EntrezGene=80115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=26203 | |HGNC=26203 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9H661,Q6UXY1 | |UniProt=Q9H661,Q6UXY1 | ||
|association_with_transcript=0bp_to_ENST00000332536,ENST00000381669,ENST00000402500,NM_025045,uc003auw.2_5end | |association_with_transcript=0bp_to_ENST00000332536,ENST00000381669,ENST00000402500,NM_025045,uc003auw.2_5end | ||
|cluster_id=chr22:38506619..38506678,- | |||
|coexpression_cluster_id=C579 | |coexpression_cluster_id=C579 | ||
|description=CAGE_peak_2_at_BAIAP2L2_5end | |description=CAGE_peak_2_at_BAIAP2L2_5end |
Latest revision as of 07:20, 20 September 2015
Short description: | p2@BAIAP2L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BAIAP2L2_5end |
Coexpression cluster: | C579_small_argyrophil_colon_duodenum_signet_temporal_Intestinal |
Association with transcript: | 0bp_to_ENST00000332536, ENST00000381669, ENST00000402500, NM_025045, uc003auw.2_5end |
EntrezGene: | BAIAP2L2 |
HGNC: | 26203 |
UniProt: | Q9H661Q6UXY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@BAIAP2L2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.08e-31 | 10 |
nephron tubule epithelial cell | 1.08e-31 | 10 |
kidney cell | 1.90e-30 | 17 |
kidney epithelial cell | 1.90e-30 | 17 |
epithelial cell of nephron | 1.24e-24 | 15 |
kidney cortical cell | 1.54e-16 | 12 |
renal cortical epithelial cell | 1.54e-16 | 12 |
brush border epithelial cell | 4.90e-11 | 3 |
kidney cortex tubule cell | 4.90e-11 | 3 |
epithelial cell of proximal tubule | 4.90e-11 | 3 |
Showing 1 to 10 of 17 entries
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.08e-31 | 10 |
kidney | 2.11e-29 | 26 |
kidney mesenchyme | 2.11e-29 | 26 |
upper urinary tract | 2.11e-29 | 26 |
kidney rudiment | 2.11e-29 | 26 |
kidney field | 2.11e-29 | 26 |
gastrointestinal system | 7.63e-28 | 25 |
abdomen element | 1.67e-27 | 54 |
abdominal segment element | 1.67e-27 | 54 |
excretory tube | 2.13e-27 | 16 |
Showing 1 to 10 of 69 entries
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 6.68e-15 | 25 |
carcinoma | 7.30e-13 | 106 |
cell type cancer | 5.89e-09 | 143 |
signet ring cell adenocarcinoma | 1.24e-08 | 2 |
tubular adenocarcinoma | 7.39e-08 | 2 |
clear cell adenocarcinoma | 7.92e-08 | 2 |
Showing 1 to 6 of 6 entries