FFCP PHASE1:Hg19::chr11:100557958..100558008,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=143872 | |EntrezGene=143872 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=26545 | |HGNC=26545 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=E9PJK4 | |UniProt=E9PJK4 | ||
|association_with_transcript=-375bp_to_ENST00000524892_5end | |association_with_transcript=-375bp_to_ENST00000524892_5end | ||
|cluster_id=chr11:100557958..100558008,+ | |||
|coexpression_cluster_id=C3067 | |coexpression_cluster_id=C3067 | ||
|description=CAGE_peak_2_at_ARHGAP42_5end | |description=CAGE_peak_2_at_ARHGAP42_5end | ||
Latest revision as of 07:35, 20 September 2015
| Short description: | p2@ARHGAP42 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_ARHGAP42_5end |
| Coexpression cluster: | C3067_medulloblastoma_lung_placenta_renal_retina_gall_rectum |
| Association with transcript: | -375bp_to_ENST00000524892_5end |
| EntrezGene: | ARHGAP42 |
| HGNC: | 26545 |
| UniProt: | E9PJK4 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@ARHGAP42 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| organ system subdivision | 1.59e-20 | 223 |
| central nervous system | 1.26e-17 | 81 |
| adult organism | 8.05e-17 | 114 |
| nervous system | 1.42e-15 | 89 |
| brain | 1.77e-15 | 68 |
| future brain | 1.77e-15 | 68 |
| neural tube | 7.38e-13 | 56 |
| neural rod | 7.38e-13 | 56 |
| future spinal cord | 7.38e-13 | 56 |
| neural keel | 7.38e-13 | 56 |
Showing 1 to 10 of 37 entries
