FFCP PHASE1:Hg19::chr5:133450458..133450469,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6932 | |EntrezGene=6932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11639 | |HGNC=11639 | ||
|TSSclassifier=strong | |||
|UniProt=B7WNT5 | |UniProt=B7WNT5 | ||
|association_with_transcript=55bp_to_ENST00000395029_5end | |association_with_transcript=55bp_to_ENST00000395029_5end | ||
|cluster_id=chr5:133450458..133450469,+ | |||
|coexpression_cluster_id=C1952 | |coexpression_cluster_id=C1952 | ||
|description=CAGE_peak_4_at_TCF7_5end | |description=CAGE_peak_4_at_TCF7_5end | ||
|id=chr5:133450458..133450469,+ | |id=chr5:133450458..133450469,+ | ||
|ontology_enrichment_celltype=CL:0000791!5.37e-09!18;CL:0000789!5.37e-09!18;CL:0002420!5.37e-09!18;CL:0002419!5.37e-09!18;CL:0000790!5.37e-09!18;CL:0000084!1.89e-08!25;CL:0000827!1.89e-08!25;CL:0000625!9.69e-07!11 | |ontology_enrichment_celltype=CL:0000791!5.37e-09!18;CL:0000789!5.37e-09!18;CL:0002420!5.37e-09!18;CL:0002419!5.37e-09!18;CL:0000790!5.37e-09!18;CL:0000084!1.89e-08!25;CL:0000827!1.89e-08!25;CL:0000625!9.69e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.75e-24;25!CL:0000791;3.33e-22;18!CL:0000789;3.33e-22;18!CL:0002419;3.33e-22;18!CL:0000625;5.54e-13;11!CL:0000624;8.49e-13;6!CL:0000542;1.46e-09;53!CL:0000226;3.15e-09;3!CL:0000623;3.15e-09;3!CL:0000842;3.15e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.09e-24,25;CL:0000827,2.09e-24,25;CL:0000791,2.71e-22,18;CL:0000789,2.71e-22,18;CL:0002420,2.71e-22,18;CL:0002419,2.71e-22,18;CL:0000790,2.71e-22,18;CL:0000838,4.45e-18,52;CL:0000542,1.23e-17,53;CL:0000051,1.23e-17,53;CL:0000625,4.27e-13,11;CL:0000624,9.25e-13,6;CL:0000623,1.92e-09,3;CL:0000825,1.92e-09,3;CL:0000226,2.49e-09,3;CL:0000842,2.49e-09,3;CL:0002087,1.25e-08,115;CL:0000738,2.96e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;3.33e-22;18!CL:0000051;1.46e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;8.11e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.09e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.37e-08;15!UBERON:0000179;1.37e-08;15!UBERON:0000463;1.37e-08;15!UBERON:0002370;1.06e-07;2!UBERON:0005058;1.06e-07;2!UBERON:0009113;1.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-08,15;UBERON:0000179,1.10e-08,15;UBERON:0000463,1.10e-08,15;UBERON:0003351,4.00e-08,6;UBERON:0002370,1.50e-07,4;UBERON:0005058,1.50e-07,4;UBERON:0009113,1.50e-07,4;UBERON:0003295,1.50e-07,4;UBERON:0005562,1.50e-07,4;UBERON:0001042,4.29e-07,10;UBERON:0009145,4.29e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0.492484232307152,0.204000691244253,0,0.286235987131057,0.410623275218653,0.125542639594803,0.687720651731561,0.656804715599566,0.550975469195755,0,0,0.77408061658038,0,0,0,0,0,0,0.553995408531877,1.80490002723128,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,1.14681968437569,0,1.12101712596307,0,4.72103448273199,3.53709686474248,2.67281948699362,0.167186495390678,2.60737813306872,2.36723902867367,3.89653456815823,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,1.15106533222573,0.552700035571697,2.89803085735052,3.11401782640327,2.67540828089713,2.09071047609954,0,1.14966148080576,0.34362744548263,1.77113784413652,2.22995790026868,1.95325036156926,0.950452044448374,0.752875595388864,2.04778577847069,0,2.8413270245282,0,3.22570789159572,3.4767225451856,4.19990771260117,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0.312160076830321,0,1.19558944441441,0,0,0,0.204154171254893,0.122834317311768,0.413303124703062,0,0,0,0,0,0,0,0,0,0.600952235626387,0.113432183160021,0,0,0.211931901159562,0,0.103052529238439,0,0.37223371266318,0.168776332241266,0.194874010322397,0,0,0,0,0,0.169560592310488,0,0,0,0.731842236777572,0,0.232387885739037,0.725627385107593,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,0,11.9195036841956,0.614942192715568,0,0,0,0,0,0,1.03993478527958,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,1.690605505112,0,0,0,0,0.799266537048298,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0.179060963239896,0,1.37921532141349,2.58753089831421,1.66845947163673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.553107505625109,0.260650843404249,0,0.343143423810856,1.24060815673732,1.94142780736755,2.02782359826544,0,0,0,0,0,0,0.128139149255701,0,0,0,0.462629081407967,0.177561725313127,1.47828880824856,1.03850885836724,0.929683027679674,0.966875596732978,0,0.0920809889358963,0,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0.325378394664303,0.309123034943167,1.19040304263846,0.82509499920588,0.574265537996172,0,0,0.386682873168488,0.308097234229289,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0.563391205064483,0.286822704408103,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,1.29694662238543,1.62009431171434,3.17250070517708,0.213648142254946,0,0.735120647943095,0,0.144269212976445,9.24843963529383,1.4348364545594,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,1.12284324244932,0.146508179271894,0,0,1.42068073403207,0,0,0,0,0.422008249231538,0,0,0,0,0.552567831062295,0,0,0.246169610922139,0,0.269605053441981,0.179021174675609,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,1.04174996959975,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0.46112780877612,0.179515288819544,0.108647371922008,0,0.183195186803725,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0.989471500037586,1.08194319871046,0,0.796118080530053,0,0,0.123563938946503,0,0.337005664903385,0,0.234264445725339,0,0,0.728341138602278,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0.173559738335131,0,0,1.04836000945218,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0.397429223405979,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0.864542502924636,0.687219576995494,0,0,0,0.707082103850386,0.67952103036807,0.523014231561666,0.407992870545287,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.6544468284517,2.47247575143499,1.61768505250044,0,0,0,0.272406812223151,0.643012593860077,0.412618309791701,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0.367182116944987,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0.679872549120754,0.439656701034247,0,0.387848869084652,0.13223260174269,0,0.704815022316672,0.106787412567695,0,0,0.992332043623902,0,0,1.27668251554036,0,0,0,0.327872630709804,1.09937867375164,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.124192805882767,0.138348634936231,0.499921631848426,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0.757612021100357,0.50313580350515,0.889811221596536,0.228840068396924,0.453692771289717,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0.3636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| ||
|short_description=p4@TCF7 | |short_description=p4@TCF7 | ||
}} | }} |
Latest revision as of 07:36, 20 September 2015
Short description: | p4@TCF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TCF7_5end |
Coexpression cluster: | C1952_thymus_Hodgkin_acute_CD8_CD4_Whole_lymph |
Association with transcript: | 55bp_to_ENST00000395029_5end |
EntrezGene: | TCF7 |
HGNC: | 11639 |
UniProt: | B7WNT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.09e-24 | 25 |
pro-T cell | 2.09e-24 | 25 |
mature alpha-beta T cell | 2.71e-22 | 18 |
alpha-beta T cell | 2.71e-22 | 18 |
immature T cell | 2.71e-22 | 18 |
mature T cell | 2.71e-22 | 18 |
immature alpha-beta T cell | 2.71e-22 | 18 |
lymphoid lineage restricted progenitor cell | 4.45e-18 | 52 |
lymphocyte | 1.23e-17 | 53 |
common lymphoid progenitor | 1.23e-17 | 53 |
CD8-positive, alpha-beta T cell | 4.27e-13 | 11 |
CD4-positive, alpha-beta T cell | 9.25e-13 | 6 |
natural killer cell | 1.92e-09 | 3 |
pro-NK cell | 1.92e-09 | 3 |
single nucleate cell | 2.49e-09 | 3 |
mononuclear cell | 2.49e-09 | 3 |
nongranular leukocyte | 1.25e-08 | 115 |
leukocyte | 2.96e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 1.10e-08 | 15 |
haemolymphatic fluid | 1.10e-08 | 15 |
organism substance | 1.10e-08 | 15 |
pharyngeal epithelium | 4.00e-08 | 6 |
thymus | 1.50e-07 | 4 |
hemolymphoid system gland | 1.50e-07 | 4 |
thymic region | 1.50e-07 | 4 |
pharyngeal gland | 1.50e-07 | 4 |
thymus primordium | 1.50e-07 | 4 |
chordate pharynx | 4.29e-07 | 10 |
pharyngeal region of foregut | 4.29e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.09e-07 | 2 |