FFCP PHASE2:Hg19::chr19:59055602..59055605,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:10155 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16384 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16384 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q13263 | ||
|association_with_transcript=-230bp_to_ENST00000253024,ENST00000341753,NM_005762,uc002qtg.1,uc010eut.1_5end | |association_with_transcript=-230bp_to_ENST00000253024,ENST00000341753,NM_005762,uc002qtg.1,uc010eut.1_5end | ||
|cluster_id=chr19:59055602..59055605,+ | |cluster_id=chr19:59055602..59055605,+ |
Latest revision as of 08:16, 20 September 2015
Short description: | p17@TRIM28 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TRIM28_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -230bp_to_ENST00000253024, ENST00000341753, NM_005762, uc002qtg.1, uc010eut.1_5end |
EntrezGene: | TRIM28 |
HGNC: | 16384 |
UniProt: | Q13263 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p17@TRIM28 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CD1a-positive Langerhans cell | 2.55e-45 | 2 |
immature CD1a-positive Langerhans cell | 2.55e-45 | 2 |
mucus secreting cell | 1.34e-23 | 1 |
multinucleate cell | 2.10e-23 | 1 |
myotube | 2.10e-23 | 1 |
Langerhans cell | 7.92e-19 | 5 |
macrophage dendritic cell progenitor | 3.04e-17 | 61 |
immature conventional dendritic cell | 7.23e-16 | 5 |
common dendritic progenitor | 7.23e-16 | 5 |
granulocyte monocyte progenitor cell | 1.02e-15 | 67 |
Showing 1 to 10 of 29 entries
Ontology term | p-value | n |
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bone marrow | 7.17e-14 | 76 |
bone element | 7.34e-13 | 82 |
skeletal element | 1.02e-11 | 90 |
immune system | 2.43e-11 | 93 |
hematopoietic system | 9.25e-11 | 98 |
blood island | 9.25e-11 | 98 |
skeletal system | 1.52e-10 | 100 |
hemolymphoid system | 9.31e-10 | 108 |
musculoskeletal system | 3.70e-08 | 167 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
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mucinous adenocarcinoma | 1.34e-23 | 1 |
Showing 1 to 1 of 1 entries