FFCP PHASE1:Hg19::chr17:40672344..40672359,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=535 | |EntrezGene=535 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=865 | |HGNC=865 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002hzu.2_5end | |association_with_transcript=0bp_to_uc002hzu.2_5end | ||
|cluster_id=chr17:40672344..40672359,+ | |||
|description=CAGE_peak_4_at_ATP6V0A1_5end | |description=CAGE_peak_4_at_ATP6V0A1_5end | ||
|id=chr17:40672344..40672359,+ | |id=chr17:40672344..40672359,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.29e-17!180;CL:0000057!2.78e-10!75;CL:0000222!3.58e-10!119;CL:0000220!9.96e-09!246;CL:0000680!1.83e-08!57;CL:0000056!1.83e-08!57;CL:0000355!1.83e-08!57;CL:0002321!1.90e-08!248;CL:0002620!1.01e-07!23;CL:0000393!1.30e-07!60;CL:0000211!1.30e-07!60;CL:0000359!1.38e-07!32;CL:0000187!3.03e-07!54;CL:0000183!4.20e-07!59 | |ontology_enrichment_celltype=CL:0000055!2.29e-17!180;CL:0000057!2.78e-10!75;CL:0000222!3.58e-10!119;CL:0000220!9.96e-09!246;CL:0000680!1.83e-08!57;CL:0000056!1.83e-08!57;CL:0000355!1.83e-08!57;CL:0002321!1.90e-08!248;CL:0002620!1.01e-07!23;CL:0000393!1.30e-07!60;CL:0000211!1.30e-07!60;CL:0000359!1.38e-07!32;CL:0000187!3.03e-07!54;CL:0000183!4.20e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002594;6.41e-18;4!CL:0000359;5.53e-17;32!CL:0002596;4.07e-16;2!CL:0000346;2.51e-11;3!CL:1000428;2.51e-11;3!CL:0000307;2.51e-11;3!CL:0000192;4.15e-10;43!CL:0002591;6.46e-09;1!CL:0000071;3.33e-07;18!CL:0002559;3.91e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.78e-18,32;CL:0002594,7.43e-18,4;CL:0002596,2.99e-16,2;CL:0000192,3.64e-13,43;CL:0000514,3.64e-13,43;CL:0000346,1.94e-11,3;CL:1000428,1.94e-11,3;CL:0000068,4.42e-11,3;CL:0000069,4.42e-11,3;CL:0000307,4.42e-11,3;CL:0000377,4.42e-11,3;CL:0000393,5.48e-11,61;CL:0000211,5.48e-11,61;CL:0000187,5.34e-10,55;CL:0000680,2.06e-09,58;CL:0000056,2.06e-09,58;CL:0000355,2.06e-09,58;CL:0002591,9.17e-09,1;CL:0000222,1.82e-08,121;CL:0002559,3.36e-07,5;CL:0000071,3.56e-07,18;CL:0002546,3.56e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000377;2.51e-11;3!CL:0000514;4.15e-10;43!CL:0002546;3.33e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.94e-14!79;UBERON:0007798!4.94e-14!79;UBERON:0000477!1.49e-12!286;UBERON:0001981!3.11e-12!60;UBERON:0007500!3.11e-12!60;UBERON:0004537!3.11e-12!60;UBERON:0006965!3.11e-12!60;UBERON:0003914!8.23e-12!118;UBERON:0000055!2.92e-11!69;UBERON:0001637!4.14e-11!42;UBERON:0003509!4.14e-11!42;UBERON:0004572!4.14e-11!42;UBERON:0005256!5.19e-11!143;UBERON:0000475!6.41e-11!365;UBERON:0000467!1.36e-10!625;UBERON:0000490!1.49e-10!138;UBERON:0004872!1.68e-10!84;UBERON:0000480!1.78e-10!626;UBERON:0000468!7.79e-10!659;UBERON:0004535!1.48e-09!110;UBERON:0000914!3.50e-09!83;UBERON:0002329!3.50e-09!83;UBERON:0003077!3.50e-09!83;UBERON:0003059!3.50e-09!83;UBERON:0007282!3.50e-09!83;UBERON:0009618!3.50e-09!83;UBERON:0007285!3.50e-09!83;UBERON:0002100!6.49e-09!216;UBERON:0001009!7.32e-09!113;UBERON:0004290!1.32e-08!70;UBERON:0000119!1.74e-08!312;UBERON:0004111!2.05e-08!241;UBERON:0000483!3.29e-08!309;UBERON:0000481!7.67e-08!347;UBERON:0004573!9.57e-08!33;UBERON:0004571!9.57e-08!33;UBERON:0000025!9.82e-08!194;UBERON:0002385!1.11e-07!63;UBERON:0001015!1.11e-07!63;UBERON:0000383!1.11e-07!63;UBERON:0003104!2.28e-07!238;UBERON:0009142!2.28e-07!238;UBERON:0001134!3.12e-07!61;UBERON:0002036!3.12e-07!61;UBERON:0003082!3.12e-07!61;UBERON:0000486!5.97e-07!82 | |ontology_enrichment_uberon=UBERON:0002049!4.94e-14!79;UBERON:0007798!4.94e-14!79;UBERON:0000477!1.49e-12!286;UBERON:0001981!3.11e-12!60;UBERON:0007500!3.11e-12!60;UBERON:0004537!3.11e-12!60;UBERON:0006965!3.11e-12!60;UBERON:0003914!8.23e-12!118;UBERON:0000055!2.92e-11!69;UBERON:0001637!4.14e-11!42;UBERON:0003509!4.14e-11!42;UBERON:0004572!4.14e-11!42;UBERON:0005256!5.19e-11!143;UBERON:0000475!6.41e-11!365;UBERON:0000467!1.36e-10!625;UBERON:0000490!1.49e-10!138;UBERON:0004872!1.68e-10!84;UBERON:0000480!1.78e-10!626;UBERON:0000468!7.79e-10!659;UBERON:0004535!1.48e-09!110;UBERON:0000914!3.50e-09!83;UBERON:0002329!3.50e-09!83;UBERON:0003077!3.50e-09!83;UBERON:0003059!3.50e-09!83;UBERON:0007282!3.50e-09!83;UBERON:0009618!3.50e-09!83;UBERON:0007285!3.50e-09!83;UBERON:0002100!6.49e-09!216;UBERON:0001009!7.32e-09!113;UBERON:0004290!1.32e-08!70;UBERON:0000119!1.74e-08!312;UBERON:0004111!2.05e-08!241;UBERON:0000483!3.29e-08!309;UBERON:0000481!7.67e-08!347;UBERON:0004573!9.57e-08!33;UBERON:0004571!9.57e-08!33;UBERON:0000025!9.82e-08!194;UBERON:0002385!1.11e-07!63;UBERON:0001015!1.11e-07!63;UBERON:0000383!1.11e-07!63;UBERON:0003104!2.28e-07!238;UBERON:0009142!2.28e-07!238;UBERON:0001134!3.12e-07!61;UBERON:0002036!3.12e-07!61;UBERON:0003082!3.12e-07!61;UBERON:0000486!5.97e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001310;6.41e-18;4!UBERON:0001637;2.61e-17;42!UBERON:0003509;2.61e-17;42!UBERON:0004572;2.61e-17;42!UBERON:0005396;4.07e-16;2!UBERON:0007500;2.19e-14;56!UBERON:0001981;2.19e-14;56!UBERON:0004537;2.19e-14;56!UBERON:0004573;5.69e-12;33!UBERON:0004571;5.69e-12;33!UBERON:0000412;2.51e-11;3!UBERON:0001992;2.51e-11;3!UBERON:0000055;3.61e-10;65!UBERON:0000947;3.84e-09;21!UBERON:0010191;3.84e-09;21!UBERON:0010260;2.94e-08;9!UBERON:0003914;1.75e-07;74!UBERON:0004638;3.33e-07;18!UBERON:0001986;3.33e-07;18!UBERON:0004852;3.33e-07;18!UBERON:0002073;3.91e-07;5!UBERON:0002049;8.24e-07;75!UBERON:0007798;8.24e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.54e-24,42;UBERON:0003509,2.54e-24,42;UBERON:0004572,2.54e-24,42;UBERON:0007500,3.29e-23,59;UBERON:0001981,3.29e-23,59;UBERON:0004537,3.29e-23,59;UBERON:0006965,3.29e-23,59;UBERON:0004872,6.35e-21,83;UBERON:0000055,8.43e-20,68;UBERON:0001310,7.43e-18,4;UBERON:0002049,6.19e-17,78;UBERON:0007798,6.19e-17,78;UBERON:0005396,2.99e-16,2;UBERON:0004535,3.15e-15,109;UBERON:0001009,9.67e-15,112;UBERON:0004573,4.75e-14,33;UBERON:0004571,4.75e-14,33;UBERON:0003914,5.52e-14,117;UBERON:0000412,1.94e-11,3;UBERON:0001992,1.94e-11,3;UBERON:0002329,2.77e-11,71;UBERON:0003059,2.77e-11,71;UBERON:0007282,2.77e-11,71;UBERON:0004290,2.77e-11,71;UBERON:0009618,2.77e-11,71;UBERON:0003077,4.21e-11,72;UBERON:0007285,4.21e-11,72;UBERON:0007524,6.34e-11,73;UBERON:0000490,1.90e-10,148;UBERON:0007503,4.18e-10,78;UBERON:0000025,1.20e-09,192;UBERON:0000486,2.20e-09,83;UBERON:0000947,3.68e-09,21;UBERON:0010191,3.68e-09,21;UBERON:0001134,1.02e-08,62;UBERON:0002036,1.02e-08,62;UBERON:0003082,1.02e-08,62;UBERON:0002385,2.10e-08,64;UBERON:0001015,2.10e-08,64;UBERON:0000383,2.10e-08,64;UBERON:0010260,3.13e-08,9;UBERON:0004111,4.23e-08,240;UBERON:0003081,8.14e-08,203;UBERON:0000483,2.28e-07,306;UBERON:0000119,2.93e-07,309;UBERON:0002073,3.36e-07,5;UBERON:0005086,3.36e-07,5;UBERON:0004638,3.56e-07,18;UBERON:0001986,3.56e-07,18;UBERON:0004852,3.56e-07,18;UBERON:0005256,5.20e-07,122 | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0.408001382488506,0.313454721478088,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,1.5905718941022,0,0,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,0,2.08284300964557,1.13061588384802,0,0,0.835979866147242,0.775250277507987,0,0,0.402829317109147,0,0.488124115096339,0,0,0,0.44905874525234,0.112611480483322,3.06633274931766,2.84779697870439,0.549605231791222,0,0,0,0,0.633152558322899,2.91300197789081,0.573673241497627,0.709336764396714,1.12135520028461,2.1349799145941,0,0,0,0.163461903113459,0.454072282934794,0.576175924479999,0,0.312160076830321,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0.816616685019573,0.122834317311768,0.413303124703062,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.125118519871964,0.554128230968366,0.438977620880838,0,0.45071417671979,0.340296549480063,0.538168907066586,0,0.211931901159562,0.600182192168805,0.412210116953756,0.772921620136887,0.558350568994769,0.675105328965065,0.0974370051611986,0.504867548488229,0.276149695926898,0.323292113637624,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,2.76269842704961,0,0,0.236613600079688,0,0,0.441175890929576,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.448524337381443,0,0.07333828582095,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0.285955987316295,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.537182889719687,0,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0.535286966391485,0.157702415033935,0.468565659970853,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.601519410909855,0,0.229628896329213,0.546273504020151,0.131124414959424,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.290012154876366,0.154048617114644,0,0.413509717453592,0,0.145016693914229,0,0.178064071293475,0,0.192190067365106,0.127612712494584,0,0,0.62962469366128,2.0911118104818,0,1.59691809095107,0.869932992075073,0.55597265731176,0.286249773483982,0,0.632758849437452,0,0.767693373934002,0,1.27281299170375,1.56989728039846,0,0.274537029736055,0.117812402345686,0.808729926293264,0,0,0,0,0,0.136499911407986,0,1.13008116620243,3.30819206127675,0.66343897524122,0,0,0,0.405820753925408,2.478587984798,1.12678241012897,0.286822704408103,0.0982490410131212,1.426684205925,0,0,0,0.75894634753143,0.349934720244983,0.0962221127255121,2.01090682660736,1.08890984861323,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0.307160702099232,0,0.140669416410513,0.445234820091624,0,0.211125408127993,0.398495976502139,0.276283915531148,0,0.20453736500431,0,0.622079175323615,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0.10893846351899,0.139423744278603,0.692552326534174,0.113942055847001,0.46112780877612,0.179515288819544,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0,1.20990716048664,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0.693373365065693,0.173559738335131,0,0.435296032902013,0.17472666824203,0.171986032471617,0.387025325156341,0.219267951258557,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0.248505071130865,0.235694034616795,0.815425236441684,0.941425616810999,0.305994652908965,0.288950589901519,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0.393709926058995,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.104909176269996,0.422401346077626,0,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0.082092520749339,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.221858103073705,0.18628920882415,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.302461847526478,0.310874401165561,0,0.31859353432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| ||
|short_description=p4@ATP6V0A1 | |short_description=p4@ATP6V0A1 | ||
}} | }} |
Latest revision as of 14:56, 24 September 2015
Short description: | p4@ATP6V0A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATP6V0A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002hzu.2_5end |
EntrezGene: | ATP6V0A1 |
HGNC: | 865 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.78e-18 | 32 |
smooth muscle cell of the umbilical artery | 7.43e-18 | 4 |
smooth muscle cell of the carotid artery | 2.99e-16 | 2 |
smooth muscle cell | 3.64e-13 | 43 |
smooth muscle myoblast | 3.64e-13 | 43 |
hair follicle dermal papilla cell | 1.94e-11 | 3 |
stem cell of epidermis | 1.94e-11 | 3 |
duct epithelial cell | 4.42e-11 | 3 |
branched duct epithelial cell | 4.42e-11 | 3 |
tracheal epithelial cell | 4.42e-11 | 3 |
tracheoblast | 4.42e-11 | 3 |
electrically responsive cell | 5.48e-11 | 61 |
electrically active cell | 5.48e-11 | 61 |
muscle cell | 5.34e-10 | 55 |
muscle precursor cell | 2.06e-09 | 58 |
myoblast | 2.06e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.06e-09 | 58 |
smooth muscle cell of the pulmonary artery | 9.17e-09 | 1 |
mesodermal cell | 1.82e-08 | 121 |
hair follicle cell | 3.36e-07 | 5 |
blood vessel endothelial cell | 3.56e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.56e-07 | 18 |