FFCP PHASE1:Hg19::chr14:55168823..55168837,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23034 | |EntrezGene=23034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23023 | |HGNC=23023 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPU9 | |UniProt=Q9UPU9 | ||
|association_with_transcript=-110bp_to_AB028976_5end | |association_with_transcript=-110bp_to_AB028976_5end | ||
|cluster_id=chr14:55168823..55168837,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_30_at_SAMD4A_5end | |description=CAGE_peak_30_at_SAMD4A_5end | ||
|id=chr14:55168823..55168837,+ | |id=chr14:55168823..55168837,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.64e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.41e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.79e-10;11!UBERON:0006215;1.74e-09;3!UBERON:0009497;1.42e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002680!2.05e-09!9;UBERON:0001895!2.05e-09!9;UBERON:0010092!2.05e-09!9;UBERON:0003076!3.15e-09!15;UBERON:0003057!3.15e-09!15;UBERON:0007023!3.88e-09!115;UBERON:0004733!4.88e-09!12;UBERON:0002028!4.88e-09!12;UBERON:0007277!4.88e-09!12;UBERON:0004732!2.95e-08!13;UBERON:0000988!4.82e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.09e-32;19!UBERON:0006925;1.09e-32;19!UBERON:0002423;5.93e-25;25!UBERON:0002365;3.83e-20;31!UBERON:0002330;3.83e-20;31!UBERON:0002368;1.97e-17;33!UBERON:0000949;1.17e-12;43!UBERON:0005172;3.70e-09;52!UBERON:0005173;3.70e-09;52!UBERON:0002417;3.91e-07;58!UBERON:0000916;3.91e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.83e-33,19;UBERON:0006925,9.83e-33,19;UBERON:0008836,9.83e-33,19;UBERON:0008835,2.47e-28,22;UBERON:0003894,2.47e-28,22;UBERON:0009854,4.03e-27,23;UBERON:0007499,5.50e-25,25;UBERON:0009497,5.50e-25,25;UBERON:0000015,5.50e-25,25;UBERON:0002423,5.50e-25,25;UBERON:0006235,5.50e-25,25;UBERON:0004161,5.50e-25,25;UBERON:0009856,4.84e-24,26;UBERON:0002365,3.16e-20,31;UBERON:0002330,3.16e-20,31;UBERON:0002368,5.89e-18,35;UBERON:0000949,4.89e-14,45;UBERON:0003929,9.64e-12,54;UBERON:0005172,9.64e-12,54;UBERON:0005173,9.64e-12,54;UBERON:0002530,9.10e-11,59;UBERON:0002417,1.36e-10,60;UBERON:0000916,1.36e-10,60;UBERON:0005911,8.43e-08,82;UBERON:0001041,2.32e-07,87 | |||
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| ||
|short_description=p30@SAMD4A | |short_description=p30@SAMD4A | ||
}} | }} |
Latest revision as of 14:56, 24 September 2015
Short description: | p30@SAMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_SAMD4A_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -110bp_to_AB028976_5end |
EntrezGene: | SAMD4A |
HGNC: | 23023 |
UniProt: | Q9UPU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.41e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 9.83e-33 | 19 |
digestive gland | 9.83e-33 | 19 |
liver bud | 9.83e-33 | 19 |
hepatic diverticulum | 2.47e-28 | 22 |
liver primordium | 2.47e-28 | 22 |
digestive tract diverticulum | 4.03e-27 | 23 |
epithelial sac | 5.50e-25 | 25 |
epithelium of foregut-midgut junction | 5.50e-25 | 25 |
anatomical boundary | 5.50e-25 | 25 |
hepatobiliary system | 5.50e-25 | 25 |
foregut-midgut junction | 5.50e-25 | 25 |
septum transversum | 5.50e-25 | 25 |
sac | 4.84e-24 | 26 |
exocrine gland | 3.16e-20 | 31 |
exocrine system | 3.16e-20 | 31 |
endocrine gland | 5.89e-18 | 35 |
endocrine system | 4.89e-14 | 45 |
gut epithelium | 9.64e-12 | 54 |
abdomen element | 9.64e-12 | 54 |
abdominal segment element | 9.64e-12 | 54 |
gland | 9.10e-11 | 59 |
abdominal segment of trunk | 1.36e-10 | 60 |
abdomen | 1.36e-10 | 60 |
endo-epithelium | 8.43e-08 | 82 |
foregut | 2.32e-07 | 87 |