FFCP PHASE1:Hg19::chr14:55494294..55494306,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122809 | |EntrezGene=122809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19392 | |HGNC=19392 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WXH5 | |UniProt=Q8WXH5 | ||
|association_with_transcript=-38bp_to_ENST00000339298_5end | |association_with_transcript=-38bp_to_ENST00000339298_5end | ||
|cluster_id=chr14:55494294..55494306,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_7_at_SOCS4_5end | |description=CAGE_peak_7_at_SOCS4_5end | ||
|id=chr14:55494294..55494306,+ | |id=chr14:55494294..55494306,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.47e-15!254;CL:0000148!4.88e-09!10;CL:0000541!4.88e-09!10;CL:0000133!2.62e-08!59;CL:0000147!4.12e-08!14;CL:0002321!6.31e-08!248;CL:0000221!1.82e-07!71;CL:0000710!2.27e-07!20;CL:0000220!3.29e-07!246;CL:0000075!6.26e-07!27;CL:0002322!6.64e-07!5 | |ontology_enrichment_celltype=CL:0000066!7.47e-15!254;CL:0000148!4.88e-09!10;CL:0000541!4.88e-09!10;CL:0000133!2.62e-08!59;CL:0000147!4.12e-08!14;CL:0002321!6.31e-08!248;CL:0000221!1.82e-07!71;CL:0000710!2.27e-07!20;CL:0000220!3.29e-07!246;CL:0000075!6.26e-07!27;CL:0002322!6.64e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.83e-40;5!CL:0000148;5.33e-20;10!CL:0000039;2.95e-19;7!CL:0000586;2.95e-19;7!CL:0000147;2.95e-14;14!CL:0002321;2.46e-13;15!CL:0000075;3.14e-10;27!CL:0000710;6.22e-10;20!CL:0002591;3.39e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.09e-40,5;CL:0000148,5.78e-20,10;CL:0000541,5.78e-20,10;CL:0000039,2.89e-19,7;CL:0000586,2.89e-19,7;CL:0000147,3.13e-14,14;CL:0000075,3.27e-10,27;CL:0000710,6.47e-10,20;CL:0002591,4.50e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.96e-20;10!UBERON:0005564;1.96e-20;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.16e-13!143;DOID:305!8.19e-12!106;DOID:162!5.74e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.92e-13;22!DOID:2994;4.92e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.52e-13,22;DOID:2994,4.52e-13,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.06e-17;8!UBERON:0003135;2.52e-12;11!UBERON:0000991;1.19e-09;21!UBERON:0000922;5.81e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.93e-17,8;UBERON:0003135,2.48e-12,11;UBERON:0000991,1.11e-09,21;UBERON:0009196,1.11e-09,21;UBERON:0009117,1.11e-09,21;UBERON:0005564,1.11e-09,21;UBERON:0004176,3.12e-09,22 | |||
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| ||
|short_description=p7@SOCS4 | |short_description=p7@SOCS4 | ||
}} | }} |
Latest revision as of 15:24, 24 September 2015
Short description: | p7@SOCS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SOCS4_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -38bp_to_ENST00000339298_5end |
EntrezGene: | SOCS4 |
HGNC: | 19392 |
UniProt: | Q8WXH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.09e-40 | 5 |
melanocyte | 5.78e-20 | 10 |
melanoblast | 5.78e-20 | 10 |
germ line cell | 2.89e-19 | 7 |
germ cell | 2.89e-19 | 7 |
pigment cell | 3.13e-14 | 14 |
columnar/cuboidal epithelial cell | 3.27e-10 | 27 |
neurecto-epithelial cell | 6.47e-10 | 20 |
smooth muscle cell of the pulmonary artery | 4.50e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 6.93e-17 | 8 |
male reproductive organ | 2.48e-12 | 11 |
gonad | 1.11e-09 | 21 |
indifferent external genitalia | 1.11e-09 | 21 |
indifferent gonad | 1.11e-09 | 21 |
gonad primordium | 1.11e-09 | 21 |
external genitalia | 3.12e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.52e-13 | 22 |
germ cell cancer | 4.52e-13 | 22 |