FFCP PHASE1:Hg19::chr19:6393445..6393460,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2962 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4652 | |||
|TSSclassifier=strong | |||
|UniProt=P35269 | |||
|association_with_transcript=10bp_to_ENST00000394456_5end | |||
|cluster_id=chr19:6393445..6393460,- | |||
|description=CAGE_peak_6_at_GTF2F1_5end | |||
|id=chr19:6393445..6393460,- | |||
|ontology_enrichment_celltype=CL:0000055!3.41e-13!180;CL:0000057!3.74e-07!75;CL:0000220!4.57e-07!246;CL:0000183!5.52e-07!59;CL:0002321!7.57e-07!248 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.41e-07,58;CL:0000056,7.41e-07,58;CL:0000355,7.41e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.20e-13!365;UBERON:0000119!9.28e-10!312;UBERON:0000483!3.58e-09!309;UBERON:0003056!4.20e-08!61;UBERON:0000481!6.90e-08!347;UBERON:0000033!2.59e-07!123;UBERON:0002346!2.94e-07!90;UBERON:0003075!3.54e-07!86;UBERON:0007284!3.54e-07!86;UBERON:0000153!7.64e-07!129;UBERON:0007811!7.64e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000970;1.09e-07;20!UBERON:0000019;4.91e-07;19!UBERON:0000047;4.91e-07;19!UBERON:0004088;4.91e-07;19!UBERON:0010230;4.91e-07;19!UBERON:0002104;4.94e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,6.64e-09,309;UBERON:0000483,2.06e-08,306;UBERON:0003056,1.68e-07,61;UBERON:0003075,2.84e-07,82;UBERON:0007284,2.84e-07,82 | |||
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|short_description=p6@GTF2F1 | |||
}} |
Latest revision as of 15:48, 24 September 2015
Short description: | p6@GTF2F1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GTF2F1_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000394456_5end |
EntrezGene: | GTF2F1 |
HGNC: | 4652 |
UniProt: | P35269 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.41e-07 | 58 |
myoblast | 7.41e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.41e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
cell layer | 6.64e-09 | 309 |
epithelium | 2.06e-08 | 306 |
pre-chordal neural plate | 1.68e-07 | 61 |
neural plate | 2.84e-07 | 82 |
presumptive neural plate | 2.84e-07 | 82 |