FFCP PHASE1:Hg19::chr3:128968437..128968505,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22820 | |EntrezGene=22820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2236 | |HGNC=2236 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y678,D6RG17 | |UniProt=Q9Y678,D6RG17 | ||
|association_with_transcript=0bp_to_ENST00000314797,ENST00000504350,ENST00000513965,ENST00000515725,NM_016128,uc003els.2,uc010htb.2_5end | |association_with_transcript=0bp_to_ENST00000314797,ENST00000504350,ENST00000513965,ENST00000515725,NM_016128,uc003els.2,uc010htb.2_5end | ||
|cluster_id=chr3:128968437..128968505,+ | |||
|coexpression_cluster_id=C562 | |||
|description=CAGE_peak_1_at_COPG_5end | |description=CAGE_peak_1_at_COPG_5end | ||
|id=chr3:128968437..128968505,+ | |id=chr3:128968437..128968505,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.36e-32!180;CL:0000680!1.69e-20!57;CL:0000056!1.69e-20!57;CL:0000355!1.69e-20!57;CL:0000183!2.29e-20!59;CL:0000187!5.71e-20!54;CL:0000192!3.96e-19!42;CL:0000514!3.96e-19!42;CL:0000222!1.19e-18!119;CL:0000057!4.38e-18!75;CL:0000359!9.97e-17!32;CL:0000393!2.84e-16!60;CL:0000211!2.84e-16!60;CL:0000220!6.93e-14!246;CL:0002321!2.66e-13!248;CL:0000548!1.72e-09!679;CL:0000004!1.72e-09!679;CL:0000255!1.72e-09!679;CL:0000012!1.35e-08!682;CL:0000144!6.70e-08!625;CL:0002371!1.16e-07!591 | |ontology_enrichment_celltype=CL:0000055!1.36e-32!180;CL:0000680!1.69e-20!57;CL:0000056!1.69e-20!57;CL:0000355!1.69e-20!57;CL:0000183!2.29e-20!59;CL:0000187!5.71e-20!54;CL:0000192!3.96e-19!42;CL:0000514!3.96e-19!42;CL:0000222!1.19e-18!119;CL:0000057!4.38e-18!75;CL:0000359!9.97e-17!32;CL:0000393!2.84e-16!60;CL:0000211!2.84e-16!60;CL:0000220!6.93e-14!246;CL:0002321!2.66e-13!248;CL:0000548!1.72e-09!679;CL:0000004!1.72e-09!679;CL:0000255!1.72e-09!679;CL:0000012!1.35e-08!682;CL:0000144!6.70e-08!625;CL:0002371!1.16e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.09e-15;32!CL:0000192;1.30e-13;43!CL:0000187;3.61e-11;55!CL:0000057;1.16e-08;73!CL:0000134;1.79e-08;55!CL:0000393;3.98e-08;61!CL:0000211;3.98e-08;61!CL:0000723;2.34e-07;61!CL:0000048;5.62e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.16e-20,58;CL:0000056,3.16e-20,58;CL:0000355,3.16e-20,58;CL:0000187,1.09e-19,55;CL:0000192,8.88e-19,43;CL:0000514,8.88e-19,43;CL:0000057,1.14e-18,76;CL:0000222,1.35e-18,121;CL:0000359,9.97e-17,32;CL:0000393,4.47e-16,61;CL:0000211,4.47e-16,61;CL:0002321,2.32e-13,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.30e-13;43!CL:0000355;1.35e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.26e-22!83;UBERON:0002329!5.26e-22!83;UBERON:0003077!5.26e-22!83;UBERON:0003059!5.26e-22!83;UBERON:0007282!5.26e-22!83;UBERON:0009618!5.26e-22!83;UBERON:0007285!5.26e-22!83;UBERON:0004290!5.02e-21!70;UBERON:0005256!7.63e-21!143;UBERON:0001134!1.02e-18!61;UBERON:0002036!1.02e-18!61;UBERON:0003082!1.02e-18!61;UBERON:0000486!1.13e-18!82;UBERON:0002385!9.24e-18!63;UBERON:0001015!9.24e-18!63;UBERON:0000383!9.24e-18!63;UBERON:0002100!9.90e-18!216;UBERON:0000475!2.19e-17!365;UBERON:0000490!5.46e-17!138;UBERON:0002049!3.98e-16!79;UBERON:0007798!3.98e-16!79;UBERON:0003914!4.92e-16!118;UBERON:0001637!1.73e-15!42;UBERON:0003509!1.73e-15!42;UBERON:0004572!1.73e-15!42;UBERON:0004872!2.99e-15!84;UBERON:0000055!6.38e-14!69;UBERON:0001981!1.38e-13!60;UBERON:0007500!1.38e-13!60;UBERON:0004537!1.38e-13!60;UBERON:0006965!1.38e-13!60;UBERON:0000119!3.36e-13!312;UBERON:0000483!8.01e-13!309;UBERON:0004573!1.63e-12!33;UBERON:0004571!1.63e-12!33;UBERON:0003104!5.23e-12!238;UBERON:0009142!5.23e-12!238;UBERON:0000481!1.58e-11!347;UBERON:0004535!1.62e-10!110;UBERON:0001009!4.65e-10!113;UBERON:0002199!1.43e-08!45;UBERON:0002416!1.43e-08!45;UBERON:0000468!1.79e-08!659;UBERON:0000477!4.28e-08!286;UBERON:0002097!3.55e-07!40;UBERON:0004111!5.86e-07!241;UBERON:0000025!6.04e-07!194;UBERON:0003102!6.37e-07!95;UBERON:0000480!9.59e-07!626 | |ontology_enrichment_uberon=UBERON:0000914!5.26e-22!83;UBERON:0002329!5.26e-22!83;UBERON:0003077!5.26e-22!83;UBERON:0003059!5.26e-22!83;UBERON:0007282!5.26e-22!83;UBERON:0009618!5.26e-22!83;UBERON:0007285!5.26e-22!83;UBERON:0004290!5.02e-21!70;UBERON:0005256!7.63e-21!143;UBERON:0001134!1.02e-18!61;UBERON:0002036!1.02e-18!61;UBERON:0003082!1.02e-18!61;UBERON:0000486!1.13e-18!82;UBERON:0002385!9.24e-18!63;UBERON:0001015!9.24e-18!63;UBERON:0000383!9.24e-18!63;UBERON:0002100!9.90e-18!216;UBERON:0000475!2.19e-17!365;UBERON:0000490!5.46e-17!138;UBERON:0002049!3.98e-16!79;UBERON:0007798!3.98e-16!79;UBERON:0003914!4.92e-16!118;UBERON:0001637!1.73e-15!42;UBERON:0003509!1.73e-15!42;UBERON:0004572!1.73e-15!42;UBERON:0004872!2.99e-15!84;UBERON:0000055!6.38e-14!69;UBERON:0001981!1.38e-13!60;UBERON:0007500!1.38e-13!60;UBERON:0004537!1.38e-13!60;UBERON:0006965!1.38e-13!60;UBERON:0000119!3.36e-13!312;UBERON:0000483!8.01e-13!309;UBERON:0004573!1.63e-12!33;UBERON:0004571!1.63e-12!33;UBERON:0003104!5.23e-12!238;UBERON:0009142!5.23e-12!238;UBERON:0000481!1.58e-11!347;UBERON:0004535!1.62e-10!110;UBERON:0001009!4.65e-10!113;UBERON:0002199!1.43e-08!45;UBERON:0002416!1.43e-08!45;UBERON:0000468!1.79e-08!659;UBERON:0000477!4.28e-08!286;UBERON:0002097!3.55e-07!40;UBERON:0004111!5.86e-07!241;UBERON:0000025!6.04e-07!194;UBERON:0003102!6.37e-07!95;UBERON:0000480!9.59e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.33e-11;33!UBERON:0004571;3.33e-11;33!UBERON:0001637;5.93e-11;42!UBERON:0003509;5.93e-11;42!UBERON:0004572;5.93e-11;42!UBERON:0007500;1.61e-08;56!UBERON:0001981;1.61e-08;56!UBERON:0004537;1.61e-08;56!UBERON:0002049;2.79e-07;75!UBERON:0007798;2.79e-07;75!UBERON:0000055;5.88e-07;65 | |||
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| ||
|short_description=p1@COPG | |short_description=p1@COPG | ||
}} | }} |
Latest revision as of 16:46, 24 September 2015
Short description: | p1@COPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COPG_5end |
Coexpression cluster: | C562_Smooth_Fibroblast_Preadipocyte_Hepatic_Alveolar_Adipocyte_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000314797, ENST00000504350, ENST00000513965, ENST00000515725, NM_016128, uc003els.2, uc010htb.2_5end |
EntrezGene: | COPG |
HGNC: | 2236 |
UniProt: | Q9Y678D6RG17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.16e-20 | 58 |
myoblast | 3.16e-20 | 58 |
multi-potent skeletal muscle stem cell | 3.16e-20 | 58 |
muscle cell | 1.09e-19 | 55 |
smooth muscle cell | 8.88e-19 | 43 |
smooth muscle myoblast | 8.88e-19 | 43 |
fibroblast | 1.14e-18 | 76 |
mesodermal cell | 1.35e-18 | 121 |
vascular associated smooth muscle cell | 9.97e-17 | 32 |
electrically responsive cell | 4.47e-16 | 61 |
electrically active cell | 4.47e-16 | 61 |
embryonic cell | 2.32e-13 | 250 |