FFCP PHASE1:Hg19::chr1:20813184..20813200,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55450 | |EntrezGene=55450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24190 | |HGNC=24190 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z7J9 | |UniProt=Q7Z7J9 | ||
|association_with_transcript=-456bp_to_NM_018584,uc001bdh.2_5end | |association_with_transcript=-456bp_to_NM_018584,uc001bdh.2_5end | ||
|cluster_id=chr1:20813184..20813200,- | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_16_at_CAMK2N1_5end | |description=CAGE_peak_16_at_CAMK2N1_5end | ||
|id=chr1:20813184..20813200,- | |id=chr1:20813184..20813200,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.58e-33;12!CL:0000228;7.62e-26;1!CL:0002372;7.62e-26;1!CL:1000415;1.21e-13;2!CL:0002535;1.21e-13;2!CL:0000056;1.80e-07;4!CL:0000737;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.72e-33,12;CL:0000228,5.93e-26,1;CL:0002372,5.93e-26,1;CL:0002535,9.40e-14,2;CL:1000415,1.21e-13,2;CL:0000737,1.69e-07,4;CL:0000515,1.69e-07,4;CL:0000223,2.67e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.63e-36;11!UBERON:0009497;5.32e-31;13!UBERON:0001041;9.45e-14;30!UBERON:0003104;3.43e-13;31!CL:0000515;1.80e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;5.20e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.14e-10,39;DOID:305,1.55e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002020!9.95e-19!34;UBERON:0003528!9.95e-19!34;UBERON:0001049!7.17e-17!57;UBERON:0005068!7.17e-17!57;UBERON:0006241!7.17e-17!57;UBERON:0007135!7.17e-17!57;UBERON:0001893!8.51e-17!34;UBERON:0001869!5.24e-16!32;UBERON:0002791!1.39e-15!33;UBERON:0002619!5.10e-15!22;UBERON:0000956!7.21e-15!25;UBERON:0000203!7.21e-15!25;UBERON:0002780!1.04e-14!41;UBERON:0001890!1.04e-14!41;UBERON:0006240!1.04e-14!41;UBERON:0002616!1.34e-14!59;UBERON:0001950!2.29e-14!20;UBERON:0003080!3.11e-14!42;UBERON:0000955!1.44e-13!69;UBERON:0006238!1.44e-13!69;UBERON:0001017!1.93e-13!82;UBERON:0005743!2.11e-13!86;UBERON:0007023!1.30e-12!115;UBERON:0002346!1.34e-12!90;UBERON:0003075!1.47e-12!86;UBERON:0007284!1.47e-12!86;UBERON:0000073!2.26e-11!94;UBERON:0001016!2.26e-11!94;UBERON:0000119!2.71e-10!312;UBERON:0003056!4.17e-10!61;UBERON:0000483!5.06e-10!309;UBERON:0000481!2.69e-09!347;UBERON:0000475!3.52e-09!365;UBERON:0000064!8.88e-09!219;UBERON:0000200!1.82e-08!6;UBERON:0000033!2.38e-08!123;UBERON:0000924!2.59e-08!173;UBERON:0006601!2.59e-08!173;UBERON:0004121!3.80e-08!169;UBERON:0004111!7.19e-08!241;UBERON:0000025!1.27e-07!194;UBERON:0000153!1.33e-07!129;UBERON:0007811!1.33e-07!129;UBERON:0000062!2.23e-07!511;UBERON:0002771!6.23e-07!3 | |ontology_enrichment_uberon=UBERON:0002020!9.95e-19!34;UBERON:0003528!9.95e-19!34;UBERON:0001049!7.17e-17!57;UBERON:0005068!7.17e-17!57;UBERON:0006241!7.17e-17!57;UBERON:0007135!7.17e-17!57;UBERON:0001893!8.51e-17!34;UBERON:0001869!5.24e-16!32;UBERON:0002791!1.39e-15!33;UBERON:0002619!5.10e-15!22;UBERON:0000956!7.21e-15!25;UBERON:0000203!7.21e-15!25;UBERON:0002780!1.04e-14!41;UBERON:0001890!1.04e-14!41;UBERON:0006240!1.04e-14!41;UBERON:0002616!1.34e-14!59;UBERON:0001950!2.29e-14!20;UBERON:0003080!3.11e-14!42;UBERON:0000955!1.44e-13!69;UBERON:0006238!1.44e-13!69;UBERON:0001017!1.93e-13!82;UBERON:0005743!2.11e-13!86;UBERON:0007023!1.30e-12!115;UBERON:0002346!1.34e-12!90;UBERON:0003075!1.47e-12!86;UBERON:0007284!1.47e-12!86;UBERON:0000073!2.26e-11!94;UBERON:0001016!2.26e-11!94;UBERON:0000119!2.71e-10!312;UBERON:0003056!4.17e-10!61;UBERON:0000483!5.06e-10!309;UBERON:0000481!2.69e-09!347;UBERON:0000475!3.52e-09!365;UBERON:0000064!8.88e-09!219;UBERON:0000200!1.82e-08!6;UBERON:0000033!2.38e-08!123;UBERON:0000924!2.59e-08!173;UBERON:0006601!2.59e-08!173;UBERON:0004121!3.80e-08!169;UBERON:0004111!7.19e-08!241;UBERON:0000025!1.27e-07!194;UBERON:0000153!1.33e-07!129;UBERON:0007811!1.33e-07!129;UBERON:0000062!2.23e-07!511;UBERON:0002771!6.23e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.73e-25;25!UBERON:0002107;2.09e-21;19!UBERON:0006925;2.09e-21;19!UBERON:0002771;1.21e-13;2!UBERON:0006955;1.21e-13;2!UBERON:0004801;1.21e-13;2!UBERON:0002365;1.25e-12;31!UBERON:0002330;1.25e-12;31!UBERON:0002368;1.61e-11;33!UBERON:0002110;1.53e-09;3!UBERON:0000949;8.14e-09;43!UBERON:0002417;2.49e-08;58!UBERON:0000916;2.49e-08;58!UBERON:0005172;1.62e-07;52!UBERON:0005173;1.62e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,4.98e-25,25;UBERON:0000015,4.98e-25,25;UBERON:0002423,4.98e-25,25;UBERON:0006235,4.98e-25,25;UBERON:0004161,4.98e-25,25;UBERON:0002107,2.20e-21,19;UBERON:0006925,2.20e-21,19;UBERON:0008836,2.20e-21,19;UBERON:0008835,1.52e-18,22;UBERON:0003894,1.52e-18,22;UBERON:0009854,9.21e-18,23;UBERON:0007499,2.20e-16,25;UBERON:0009856,8.97e-16,26;UBERON:0006955,9.40e-14,2;UBERON:0004801,9.40e-14,2;UBERON:0002771,1.55e-13,2;UBERON:0002365,2.61e-13,31;UBERON:0002330,2.61e-13,31;UBERON:0002368,7.69e-12,35;UBERON:0003929,9.21e-12,54;UBERON:0005172,9.21e-12,54;UBERON:0005173,9.21e-12,54;UBERON:0002417,1.31e-10,60;UBERON:0000916,1.31e-10,60;UBERON:0002110,1.54e-09,3;UBERON:0006242,1.54e-09,3;UBERON:0000949,2.65e-09,45;UBERON:0005911,8.19e-08,82;UBERON:0005256,2.07e-07,122;UBERON:0002530,3.50e-07,59 | |||
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|short_description=p16@CAMK2N1 | |short_description=p16@CAMK2N1 | ||
}} | }} |
Latest revision as of 17:42, 24 September 2015
Short description: | p16@CAMK2N1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CAMK2N1_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -456bp_to_NM_018584, uc001bdh.2_5end |
EntrezGene: | CAMK2N1 |
HGNC: | 24190 |
UniProt: | Q7Z7J9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.72e-33 | 12 |
multinucleate cell | 5.93e-26 | 1 |
myotube | 5.93e-26 | 1 |
epithelial cell of cervix | 9.40e-14 | 2 |
epithelial cell of gall bladder | 1.21e-13 | 2 |
striated muscle cell | 1.69e-07 | 4 |
skeletal muscle myoblast | 1.69e-07 | 4 |
endodermal cell | 2.67e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 4.98e-25 | 25 |
anatomical boundary | 4.98e-25 | 25 |
hepatobiliary system | 4.98e-25 | 25 |
foregut-midgut junction | 4.98e-25 | 25 |
septum transversum | 4.98e-25 | 25 |
liver | 2.20e-21 | 19 |
digestive gland | 2.20e-21 | 19 |
liver bud | 2.20e-21 | 19 |
hepatic diverticulum | 1.52e-18 | 22 |
liver primordium | 1.52e-18 | 22 |
digestive tract diverticulum | 9.21e-18 | 23 |
epithelial sac | 2.20e-16 | 25 |
sac | 8.97e-16 | 26 |
uterine epithelium | 9.40e-14 | 2 |
cervix epithelium | 9.40e-14 | 2 |
middle temporal gyrus | 1.55e-13 | 2 |
exocrine gland | 2.61e-13 | 31 |
exocrine system | 2.61e-13 | 31 |
endocrine gland | 7.69e-12 | 35 |
gut epithelium | 9.21e-12 | 54 |
abdomen element | 9.21e-12 | 54 |
abdominal segment element | 9.21e-12 | 54 |
abdominal segment of trunk | 1.31e-10 | 60 |
abdomen | 1.31e-10 | 60 |
gallbladder | 1.54e-09 | 3 |
gall bladder primordium | 1.54e-09 | 3 |
endocrine system | 2.65e-09 | 45 |
endo-epithelium | 8.19e-08 | 82 |
trunk mesenchyme | 2.07e-07 | 122 |
gland | 3.50e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.14e-10 | 39 |
carcinoma | 1.55e-08 | 106 |