FFCP PHASE1:Hg19::chr6:1312688..1312701,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94234 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20951 | |||
|TSSclassifier=strong | |||
|UniProt=Q9C009 | |||
|association_with_transcript=13bp_to_ENST00000296839,NM_033260,uc003mtl.3_5end | |||
|cluster_id=chr6:1312688..1312701,+ | |||
|description=CAGE_peak_3_at_FOXQ1_5end | |||
|id=chr6:1312688..1312701,+ | |||
|ontology_enrichment_celltype=CL:0000223!2.95e-12!59;CL:0002076!4.99e-12!43;CL:0000066!4.20e-11!254;CL:0002251!8.97e-11!21 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.38e-31;3!CL:0002251;1.65e-18;20!CL:0002623;2.25e-15;3!CL:0002231;4.93e-15;3!CL:0002076;5.08e-11;42!CL:0000622;1.36e-09;5!CL:0000182;1.19e-08;12!CL:0000154;3.90e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.62e-31,3;CL:0000223,2.11e-20,58;CL:0002251,1.82e-18,20;CL:0002623,2.42e-15,3;CL:0002076,4.88e-15,42;CL:0002231,5.68e-15,3;CL:0000622,1.42e-09,5;CL:0000182,1.17e-08,12;CL:0000154,4.04e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000223;5.27e-15;58!UBERON:0004161;2.15e-09;11!UBERON:0009497;5.04e-08;13 | |||
|ontology_enrichment_disease=DOID:305!9.59e-18!106;DOID:0050687!1.18e-12!143;DOID:1749!7.21e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.01e-11;1!DOID:1357;1.01e-11;1!DOID:3119;3.15e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.81e-11,1;DOID:1357,1.81e-11,1;DOID:3119,3.26e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.31e-18!169;UBERON:0000925!4.31e-18!169;UBERON:0006595!4.31e-18!169;UBERON:0001007!6.71e-16!155;UBERON:0001555!6.71e-16!155;UBERON:0007026!6.71e-16!155;UBERON:0004921!6.86e-15!129;UBERON:0004185!6.86e-15!129;UBERON:0000077!6.88e-14!130;UBERON:0001041!2.29e-10!98;UBERON:0000344!9.85e-09!12;UBERON:0000161!1.22e-08!35;UBERON:0001004!1.26e-08!72;UBERON:0001737!4.27e-08!9;UBERON:0005911!5.37e-08!82;UBERON:0002294!2.00e-07!7;UBERON:0001173!2.00e-07!7;UBERON:0004912!2.00e-07!7;UBERON:0000481!5.58e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;3.07e-19;5!UBERON:0010039;3.07e-19;5!UBERON:0001041;1.02e-18;14!UBERON:0000996;1.01e-11;1!UBERON:0001764;1.01e-11;1!UBERON:0001825;1.01e-11;1!UBERON:0004921;3.68e-09;33!UBERON:0002365;2.70e-08;31!UBERON:0002330;2.70e-08;31!UBERON:0001044;3.90e-08;6!UBERON:0003293;3.90e-08;6!UBERON:0003294;3.90e-08;6!UBERON:0010047;3.90e-08;6!UBERON:0003408;3.90e-08;6!UBERON:0000167;3.90e-08;6!UBERON:0005409;1.94e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,4.33e-13,118;UBERON:0000945,3.12e-12,8;UBERON:0010039,3.12e-12,8;UBERON:0000996,5.62e-12,1;UBERON:0001764,1.81e-11,1;UBERON:0001825,1.81e-11,1;UBERON:0004119,8.65e-11,160;UBERON:0000925,8.65e-11,160;UBERON:0006595,8.65e-11,160;UBERON:0001007,2.64e-10,145;UBERON:0001555,2.64e-10,145;UBERON:0007026,2.64e-10,145;UBERON:0001041,9.96e-09,87;UBERON:0002365,1.37e-08,31;UBERON:0002330,1.37e-08,31;UBERON:0002530,3.35e-08,59;UBERON:0001044,4.04e-08,6;UBERON:0003293,4.04e-08,6;UBERON:0003294,4.04e-08,6;UBERON:0010047,4.04e-08,6;UBERON:0000167,4.04e-08,6;UBERON:0000162,2.46e-07,14;UBERON:0001353,2.46e-07,14;UBERON:0000163,2.46e-07,14;UBERON:0006866,2.46e-07,14;UBERON:0000164,2.46e-07,14;UBERON:0000931,2.46e-07,14;UBERON:0000161,2.80e-07,36;UBERON:0004122,7.05e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.376484679085209,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0.196468613246569,0,0,0,0.522389211897802,1.59549552622638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.337169380156203,0.241011029883482,0.882351781859152,0.871517776369625,0.949082476444386,0.269662616320329,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0.519254429183621,1.27831416305955,2.53804844142407,0.40101294060657,1.28913384510255,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0.716084698702437,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0.557694977114413,0.230850775511391,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0.195984794828755,0,0.17472666824203,0,0.19351266257817,0.584714536689484,0.164230914106418,0.0969890164884194,0,0,0,0,0.189932387867636,0,0.0801588202515337,0.640358984218058,1.79828648623917,1.29681375438695,0,0,0.288109595976299,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59984501613838,3.29663433524666,2.42652757875066,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,4.66147082265396,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,1.25643277000187,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0.568209015825267,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0.438568099157414,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0.491545817507439,0.422624246717254,0,0,0,0,0.368211900503681,0.279759015438889,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0.11796972334774,0.550285795565037,0.231051332300676,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0.546974809018219,0,0,0,0.766574565837572,0.535701835878287,0,0,0,0,0,0,0,0.131545547125698,0,0,0.313972371402056,0,0,0,0.215927591218621,0,0,0,0,0,0,0.62164849248911,3.58508801897295,2.07377898544228,0,0,0,0,0.22910686854405,0,0,0.335566295393377,1.27595303699816,0,0,0,0,0.971421986118279,0,0,0,0.67767649223376,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.705789743431384,0.160482733378337,0,0.458729283404541,0,0.315543124386369,0,0,0.5290268405154,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.12729431655633,0.404234377916439,0.435433495793923,0,0.0673520530145875,0.0717222053926763,0,0.407016343054873,0,0,0,0,0,0,1.99727032255654,0,0 | |||
|short_description=p3@FOXQ1 | |||
}} |
Latest revision as of 17:53, 24 September 2015
Short description: | p3@FOXQ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOXQ1_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000296839, NM_033260, uc003mtl.3_5end |
EntrezGene: | FOXQ1 |
HGNC: | 20951 |
UniProt: | Q9C009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.62e-31 | 3 |
endodermal cell | 2.11e-20 | 58 |
epithelial cell of alimentary canal | 1.82e-18 | 20 |
acinar cell of salivary gland | 2.42e-15 | 3 |
endo-epithelial cell | 4.88e-15 | 42 |
epithelial cell of prostate | 5.68e-15 | 3 |
acinar cell | 1.42e-09 | 5 |
hepatocyte | 1.17e-08 | 12 |
protein secreting cell | 4.04e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 4.33e-13 | 118 |
stomach | 3.12e-12 | 8 |
food storage organ | 3.12e-12 | 8 |
vagina | 5.62e-12 | 1 |
maxillary sinus | 1.81e-11 | 1 |
paranasal sinus | 1.81e-11 | 1 |
endoderm-derived structure | 8.65e-11 | 160 |
endoderm | 8.65e-11 | 160 |
presumptive endoderm | 8.65e-11 | 160 |
digestive system | 2.64e-10 | 145 |
digestive tract | 2.64e-10 | 145 |
primitive gut | 2.64e-10 | 145 |
foregut | 9.96e-09 | 87 |
exocrine gland | 1.37e-08 | 31 |
exocrine system | 1.37e-08 | 31 |
gland | 3.35e-08 | 59 |
saliva-secreting gland | 4.04e-08 | 6 |
gland of oral region | 4.04e-08 | 6 |
gland of foregut | 4.04e-08 | 6 |
oral gland | 4.04e-08 | 6 |
oral cavity | 4.04e-08 | 6 |
cloaca | 2.46e-07 | 14 |
anal region | 2.46e-07 | 14 |
embryonic cloaca | 2.46e-07 | 14 |
terminal part of digestive tract | 2.46e-07 | 14 |
primitive urogenital sinus | 2.46e-07 | 14 |
proctodeum | 2.46e-07 | 14 |
orifice | 2.80e-07 | 36 |
genitourinary system | 7.05e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.81e-11 | 1 |
maxillary sinus cancer | 1.81e-11 | 1 |
gastrointestinal system cancer | 3.26e-07 | 14 |