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FFCP PHASE1:Hg19::chr3:12941525..12941554,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:12941525..12941554,-
|DHSsupport=supported 
|short_description=p13@IQSEC1
|DPIdataset=robust
|description=CAGE_peak_13_at_IQSEC1_5end
|association_with_transcript=68bp_to_BC008088_5end
|EntrezGene=9922
|EntrezGene=9922
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=29112
|HGNC=29112
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=68bp_to_BC008088_5end
|cluster_id=chr3:12941525..12941554,-
|description=CAGE_peak_13_at_IQSEC1_5end
|id=chr3:12941525..12941554,-
|ontology_enrichment_celltype=CL:0002057!1.19e-10!42;CL:0000766!5.89e-10!76;CL:0000839!2.80e-09!70;CL:0000860!3.04e-09!45;CL:0000738!9.35e-09!140;CL:0002087!1.38e-08!119;CL:0002194!1.51e-08!63;CL:0000576!1.51e-08!63;CL:0000040!1.51e-08!63;CL:0000559!1.51e-08!63;CL:0002031!3.19e-08!124;CL:0002009!6.28e-08!65;CL:0002032!8.09e-08!165;CL:0000837!8.09e-08!165;CL:0000557!1.37e-07!71;CL:0000037!1.44e-07!172;CL:0000566!1.44e-07!172;CL:0000763!3.26e-07!112;CL:0000049!3.26e-07!112;CL:0000988!8.53e-07!182
|ontology_enrichment_celltype_v019=CL:0000775;1.59e-22;3!CL:0000473;8.72e-11;39!CL:0000234;8.72e-11;39!CL:0000094;9.14e-09;8!CL:0000766;2.32e-08;69!CL:0002174;3.44e-08;1!CL:0000501;3.44e-08;1!CL:0000860;6.05e-08;33!CL:0002057;6.05e-08;33
|ontology_enrichment_celltype_v019_2=CL:0000775,1.61e-22,3;CL:0000766,1.91e-11,72;CL:0000473,4.10e-10,48;CL:0000234,4.10e-10,48;CL:0000094,9.17e-09,8;CL:0002174,3.57e-08,1;CL:0000501,3.57e-08,1;CL:0002194,8.12e-08,59;CL:0000576,8.12e-08,59;CL:0000040,8.12e-08,59;CL:0000559,8.12e-08,59;CL:0002009,1.61e-07,61;CL:0000738,3.30e-07,136;CL:0000860,4.04e-07,42;CL:0002057,4.04e-07,42;CL:0000763,5.93e-07,108;CL:0000049,5.93e-07,108;CL:0000839,7.37e-07,66;CL:0000557,9.74e-07,67
|ontology_enrichment_development_v019=UBERON:0005754;3.44e-08;1!UBERON:0004874;3.44e-08;1!CL:0002057;6.25e-07;42
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=UBERON:0000989;3.44e-08;1!UBERON:0000998;3.44e-08;1!UBERON:0008811;3.44e-08;1!UBERON:0006868;3.44e-08;1
|ontology_enrichment_uberon_v019_2=UBERON:0000989,1.63e-08,1;UBERON:0008811,1.63e-08,1;UBERON:0006258,1.63e-08,1;UBERON:0005876,1.63e-08,1;UBERON:0004874,1.63e-08,1;UBERON:0000998,3.83e-08,1;UBERON:0006868,3.83e-08,1;UBERON:0002390,8.02e-08,98;UBERON:0003061,8.02e-08,98;UBERON:0002193,6.54e-07,108
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|short_description=p13@IQSEC1
}}
}}

Latest revision as of 18:09, 24 September 2015

Short description:p13@IQSEC1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_13_at_IQSEC1_5end
Coexpression cluster:NA
Association with transcript: 68bp_to_BC008088_5end
EntrezGene:IQSEC1
HGNC: 29112
UniProt: NA
Genome view:ZENBU


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CAGE Expression




0.0
1.0
2.0
3.0
4.0
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data