FFCP PHASE1:Hg19::chr6:132270672..132270706,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1490 | |EntrezGene=1490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2500 | |HGNC=2500 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-285bp_to_AF127918_5end | |association_with_transcript=-285bp_to_AF127918_5end | ||
|cluster_id=chr6:132270672..132270706,- | |||
|coexpression_cluster_id=C506 | |||
|description=CAGE_peak_8_at_CTGF_5end | |description=CAGE_peak_8_at_CTGF_5end | ||
|id=chr6:132270672..132270706,- | |id=chr6:132270672..132270706,- | ||
|ontology_enrichment_celltype=CL:0000055!3.77e-26!180;CL:0000222!2.93e-22!119;CL:0000680!7.61e-17!57;CL:0000056!7.61e-17!57;CL:0000355!7.61e-17!57;CL:0000187!4.13e-16!54;CL:0000192!6.58e-16!42;CL:0000514!6.58e-16!42;CL:0000393!8.47e-16!60;CL:0000211!8.47e-16!60;CL:0000183!9.28e-16!59;CL:0000220!1.69e-14!246;CL:0002321!2.29e-14!248;CL:0000359!5.69e-14!32;CL:0000057!7.08e-10!75;CL:0002139!1.12e-09!24;CL:0000115!2.40e-08!35;CL:0002078!9.24e-08!44;CL:0000213!9.74e-08!57;CL:0000215!9.74e-08!57;CL:0002494!4.05e-07!16 | |ontology_enrichment_celltype=CL:0000055!3.77e-26!180;CL:0000222!2.93e-22!119;CL:0000680!7.61e-17!57;CL:0000056!7.61e-17!57;CL:0000355!7.61e-17!57;CL:0000187!4.13e-16!54;CL:0000192!6.58e-16!42;CL:0000514!6.58e-16!42;CL:0000393!8.47e-16!60;CL:0000211!8.47e-16!60;CL:0000183!9.28e-16!59;CL:0000220!1.69e-14!246;CL:0002321!2.29e-14!248;CL:0000359!5.69e-14!32;CL:0000057!7.08e-10!75;CL:0002139!1.12e-09!24;CL:0000115!2.40e-08!35;CL:0002078!9.24e-08!44;CL:0000213!9.74e-08!57;CL:0000215!9.74e-08!57;CL:0002494!4.05e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.11e-16;32!CL:0000192;6.79e-10;43!CL:0000115;1.62e-09;36!CL:0002139;3.52e-09;24!CL:0002078;7.44e-08;45!CL:0002334;1.10e-07;12!CL:0002138;1.42e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.80e-17,32;CL:0000222,4.25e-17,121;CL:0000192,1.85e-14,43;CL:0000514,1.85e-14,43;CL:0000680,3.98e-12,58;CL:0000056,3.98e-12,58;CL:0000355,3.98e-12,58;CL:0000187,1.94e-11,55;CL:0000115,1.04e-10,36;CL:0000393,2.48e-10,61;CL:0000211,2.48e-10,61;CL:0002078,3.17e-10,45;CL:0002139,4.37e-09,24;CL:0000057,1.03e-08,76;CL:0002334,1.12e-07,12;CL:0002321,1.68e-07,250;CL:0005020,1.70e-07,6;CL:0002138,1.70e-07,6;CL:0005022,1.70e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;6.79e-10;43!CL:0005022;1.42e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;7.58e-18;42!UBERON:0003509;7.58e-18;42!UBERON:0004572;7.58e-18;42!UBERON:0004573;1.27e-14;33!UBERON:0004571;1.27e-14;33!UBERON:0002049;1.99e-13;75!UBERON:0007798;1.99e-13;75!UBERON:0000055;3.88e-13;65!UBERON:0007500;7.90e-12;56!UBERON:0001981;7.90e-12;56!UBERON:0004537;7.90e-12;56!UBERON:0003914;2.39e-09;74!UBERON:0004457;1.24e-08;9!UBERON:0000042;1.24e-08;9!UBERON:0003688;2.98e-08;6!UBERON:0002358;2.98e-08;6!UBERON:0003684;2.98e-08;6!UBERON:0001178;2.98e-08;6!UBERON:0000947;9.06e-08;21!UBERON:0010191;9.06e-08;21!UBERON:0001473;2.50e-07;8!UBERON:0004536;2.50e-07;8!UBERON:0006558;2.50e-07;8!UBERON:0004535;4.18e-07;109 | |||
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| ||
|short_description=p8@CTGF | |short_description=p8@CTGF | ||
}} | }} |
Latest revision as of 18:59, 24 September 2015
Short description: | p8@CTGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CTGF_5end |
Coexpression cluster: | C506_Smooth_Renal_Endothelial_hepatic_Adipocyte_Fibroblast_Preadipocyte |
Association with transcript: | -285bp_to_AF127918_5end |
EntrezGene: | CTGF |
HGNC: | 2500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.80e-17 | 32 |
mesodermal cell | 4.25e-17 | 121 |
smooth muscle cell | 1.85e-14 | 43 |
smooth muscle myoblast | 1.85e-14 | 43 |
muscle precursor cell | 3.98e-12 | 58 |
myoblast | 3.98e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.98e-12 | 58 |
muscle cell | 1.94e-11 | 55 |
endothelial cell | 1.04e-10 | 36 |
electrically responsive cell | 2.48e-10 | 61 |
electrically active cell | 2.48e-10 | 61 |
meso-epithelial cell | 3.17e-10 | 45 |
endothelial cell of vascular tree | 4.37e-09 | 24 |
fibroblast | 1.03e-08 | 76 |
preadipocyte | 1.12e-07 | 12 |
embryonic cell | 1.68e-07 | 250 |
lymphangioblast | 1.70e-07 | 6 |
endothelial cell of lymphatic vessel | 1.70e-07 | 6 |
vascular lymphangioblast | 1.70e-07 | 6 |