FFCP PHASE1:Hg19::chr7:102937872..102937909,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:102937872..102937909,+
|short_description=p1@PMPCB
|description=CAGE_peak_1_at_PMPCB_5end
|association_with_transcript=0bp_to_ENST00000420236,ENST000004281...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9512 | |EntrezGene=9512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9119 | |HGNC=9119 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERZ4,G3V0E4,F8WBE1,F8WEC8,F8WEA6,F8WAZ6,B3KM34,O75439,Q96CP5 | |UniProt=E7ERZ4,G3V0E4,F8WBE1,F8WEC8,F8WEA6,F8WAZ6,B3KM34,O75439,Q96CP5 | ||
|association_with_transcript=0bp_to_ENST00000420236,ENST00000428154,ENST00000443722,ENST00000444457,ENST00000453466,ENST00000456433,ENST00000498530,NM_004279,uc003vbk.1,uc003vbl.2,uc003vbm.2,uc010liu.1,uc010liv.2,uc010liw.2,uc011kll.1_5end | |||
|cluster_id=chr7:102937872..102937909,+ | |||
|description=CAGE_peak_1_at_PMPCB_5end | |||
|id=chr7:102937872..102937909,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.48e-24!53;CL:0000051!1.48e-24!53;CL:0000838!5.82e-24!52;CL:0000945!7.94e-13!24;CL:0000826!7.94e-13!24;CL:0002087!9.61e-13!119;CL:0000037!9.08e-12!172;CL:0000566!9.08e-12!172;CL:0000738!2.05e-11!140;CL:0002031!2.80e-11!124;CL:0000084!2.91e-11!25;CL:0000827!2.91e-11!25;CL:0002032!1.76e-10!165;CL:0000837!1.76e-10!165;CL:0000988!2.20e-10!182;CL:0000791!2.60e-10!18;CL:0000789!2.60e-10!18;CL:0002420!2.60e-10!18;CL:0002419!2.60e-10!18;CL:0000790!2.60e-10!18;CL:0000236!8.85e-08!14;CL:0000625!9.97e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.19e-14;53!CL:0000945;7.67e-13;24!CL:0000084;2.97e-11;25!CL:0000791;2.59e-10;18!CL:0000789;2.59e-10;18!CL:0002419;2.59e-10;18!CL:0000236;1.35e-07;13!CL:0000625;9.90e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.48e-24,53;CL:0000051,1.48e-24,53;CL:0000838,5.82e-24,52;CL:0000945,7.94e-13,24;CL:0000826,7.94e-13,24;CL:0002087,2.62e-12,115;CL:0000037,2.49e-11,168;CL:0000084,2.91e-11,25;CL:0000827,2.91e-11,25;CL:0000738,5.55e-11,136;CL:0002031,7.51e-11,120;CL:0000988,2.15e-10,177;CL:0000791,2.60e-10,18;CL:0000789,2.60e-10,18;CL:0002420,2.60e-10,18;CL:0002419,2.60e-10,18;CL:0000790,2.60e-10,18;CL:0002032,4.64e-10,161;CL:0000837,4.64e-10,161;CL:0000236,8.85e-08,14;CL:0000625,9.97e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;3.19e-14;53!CL:0000790;2.59e-10;18 | |||
|ontology_enrichment_disease=DOID:162!2.40e-07!235;DOID:14566!4.40e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.40e-07,235;DOID:14566,4.40e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@PMPCB | |||
}} | }} |
Latest revision as of 19:34, 24 September 2015
Short description: | p1@PMPCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PMPCB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000420236, ENST00000428154, ENST00000443722, ENST00000444457, ENST00000453466, ENST00000456433, ENST00000498530, NM_004279, uc003vbk.1, uc003vbl.2, uc003vbm.2, uc010liu.1, uc010liv.2, uc010liw.2, uc011kll.1_5end |
EntrezGene: | PMPCB |
HGNC: | 9119 |
UniProt: | E7ERZ4G3V0E4F8WBE1F8WEC8F8WEA6F8WAZ6B3KM34O75439Q96CP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.48e-24 | 53 |
common lymphoid progenitor | 1.48e-24 | 53 |
lymphoid lineage restricted progenitor cell | 5.82e-24 | 52 |
lymphocyte of B lineage | 7.94e-13 | 24 |
pro-B cell | 7.94e-13 | 24 |
nongranular leukocyte | 2.62e-12 | 115 |
hematopoietic stem cell | 2.49e-11 | 168 |
T cell | 2.91e-11 | 25 |
pro-T cell | 2.91e-11 | 25 |
leukocyte | 5.55e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 7.51e-11 | 120 |
hematopoietic cell | 2.15e-10 | 177 |
mature alpha-beta T cell | 2.60e-10 | 18 |
alpha-beta T cell | 2.60e-10 | 18 |
immature T cell | 2.60e-10 | 18 |
mature T cell | 2.60e-10 | 18 |
immature alpha-beta T cell | 2.60e-10 | 18 |
hematopoietic oligopotent progenitor cell | 4.64e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.64e-10 | 161 |
B cell | 8.85e-08 | 14 |
CD8-positive, alpha-beta T cell | 9.97e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.40e-07 | 235 |
disease of cellular proliferation | 4.40e-07 | 239 |