FFCP PHASE1:Hg19::chr14:60194285..60194311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6252 | |EntrezGene=6252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10467 | |HGNC=10467 | ||
|TSSclassifier=strong | |||
|UniProt=Q16799 | |UniProt=Q16799 | ||
|association_with_transcript=119bp_to_ENST00000432103,uc001xem.1_5end | |association_with_transcript=119bp_to_ENST00000432103,uc001xem.1_5end | ||
|cluster_id=chr14:60194285..60194311,- | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_10_at_RTN1_5end | |description=CAGE_peak_10_at_RTN1_5end | ||
|id=chr14:60194285..60194311,- | |id=chr14:60194285..60194311,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;5.96e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.47e-09,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.22e-31!57;UBERON:0005068!5.22e-31!57;UBERON:0006241!5.22e-31!57;UBERON:0007135!5.22e-31!57;UBERON:0002616!8.45e-30!59;UBERON:0002619!9.30e-30!22;UBERON:0000955!9.73e-30!69;UBERON:0006238!9.73e-30!69;UBERON:0001950!8.38e-28!20;UBERON:0001017!1.04e-26!82;UBERON:0000073!1.12e-26!94;UBERON:0001016!1.12e-26!94;UBERON:0001869!1.48e-26!32;UBERON:0000956!5.44e-26!25;UBERON:0000203!5.44e-26!25;UBERON:0005743!3.18e-25!86;UBERON:0002020!5.97e-25!34;UBERON:0003528!5.97e-25!34;UBERON:0001893!7.69e-25!34;UBERON:0002780!5.25e-23!41;UBERON:0001890!5.25e-23!41;UBERON:0006240!5.25e-23!41;UBERON:0003080!2.20e-22!42;UBERON:0002791!2.35e-22!33;UBERON:0003075!6.21e-19!86;UBERON:0007284!6.21e-19!86;UBERON:0002346!7.11e-18!90;UBERON:0007023!4.30e-16!115;UBERON:0000033!5.93e-16!123;UBERON:0000153!5.87e-15!129;UBERON:0007811!5.87e-15!129;UBERON:0003056!2.11e-14!61;UBERON:0004121!1.60e-13!169;UBERON:0000924!4.54e-13!173;UBERON:0006601!4.54e-13!173;UBERON:0004733!2.73e-12!12;UBERON:0002028!2.73e-12!12;UBERON:0007277!2.73e-12!12;UBERON:0000200!5.65e-12!6;UBERON:0004732!2.67e-11!13;UBERON:0001870!4.20e-10!2;UBERON:0003076!1.03e-09!15;UBERON:0003057!1.03e-09!15;UBERON:0001871!2.92e-09!7;UBERON:0002021!1.36e-08!5;UBERON:0002298!1.51e-08!8;UBERON:0002680!6.93e-08!9;UBERON:0001895!6.93e-08!9;UBERON:0010092!6.93e-08!9;UBERON:0000025!2.38e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.71e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.60e-14,5 | |||
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| ||
|short_description=p10@RTN1 | |short_description=p10@RTN1 | ||
}} | }} |
Latest revision as of 20:00, 24 September 2015
Short description: | p10@RTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RTN1_5end |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | 119bp_to_ENST00000432103, uc001xem.1_5end |
EntrezGene: | RTN1 |
HGNC: | 10467 |
UniProt: | Q16799 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.60e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |