FFCP PHASE1:Hg19::chr5:136328633..136328637,-: Difference between revisions
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|id=chr5:136328633..136328637,-
|short_description=p26@SPOCK1
|description=CAGE_peak_26_at_SPOCK1_5end
|association_with_transcript=211bp_to_ENST00000508642_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6695 | |EntrezGene=6695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11251 | |HGNC=11251 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=211bp_to_ENST00000508642_5end | |||
|cluster_id=chr5:136328633..136328637,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_26_at_SPOCK1_5end | |||
|id=chr5:136328633..136328637,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.05e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.47e-09,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!7.41e-67!2;UBERON:0002757!7.41e-67!2;UBERON:0010134!7.41e-67!2;UBERON:0002784!7.41e-67!2;UBERON:0005408!7.41e-67!2;UBERON:0001899!7.41e-67!2;UBERON:0003296!4.28e-34!4;UBERON:0010133!4.28e-34!4;UBERON:0001894!5.35e-20!7;UBERON:0006222!5.35e-20!7;UBERON:0002360!9.07e-18!2;UBERON:0000094!9.07e-18!2;UBERON:0007645!9.07e-18!2;UBERON:0001870!1.27e-17!2;UBERON:0001017!1.45e-14!82;UBERON:0005743!6.34e-14!86;UBERON:0000073!1.13e-12!94;UBERON:0001016!1.13e-12!94;UBERON:0003075!6.12e-10!86;UBERON:0007284!6.12e-10!86;UBERON:0002346!1.61e-09!90;UBERON:0003056!4.34e-09!61;UBERON:0000955!5.32e-08!69;UBERON:0006238!5.32e-08!69;UBERON:0000966!7.01e-08!5;UBERON:0005388!7.01e-08!5;UBERON:0001802!7.01e-08!5;UBERON:0002780!7.76e-08!41;UBERON:0001890!7.76e-08!41;UBERON:0006240!7.76e-08!41;UBERON:0003080!1.14e-07!42;UBERON:0004121!2.66e-07!169;UBERON:0000924!3.85e-07!173;UBERON:0006601!3.85e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.61e-131;2!UBERON:0002757;4.61e-131;2!UBERON:0010134;4.61e-131;2!UBERON:0005408;4.61e-131;2!UBERON:0001899;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0002784;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0000949;5.39e-08;43!UBERON:0002368;5.42e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.61e-131,2;UBERON:0002757,4.61e-131,2;UBERON:0010134,4.61e-131,2;UBERON:0005408,4.61e-131,2;UBERON:0001899,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0002784,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0002368,1.09e-08,35;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p26@SPOCK1 | |||
}} | }} |
Latest revision as of 20:30, 24 September 2015
Short description: | p26@SPOCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_SPOCK1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 211bp_to_ENST00000508642_5end |
EntrezGene: | SPOCK1 |
HGNC: | 11251 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.61e-131 | 2 |
regional part of epithalamus | 4.61e-131 | 2 |
secretory circumventricular organ | 4.61e-131 | 2 |
circumventricular organ | 4.61e-131 | 2 |
epithalamus | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
regional part of diencephalon | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
endocrine gland | 1.09e-08 | 35 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |
endocrine system | 5.42e-07 | 45 |