FFCP PHASE2:Hg19::chr11:104905868..104905889,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:834 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1499 |TSSclassi...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1499 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B4DVD8,Q5FBZ0 | ||
|association_with_transcript=0bp_to_ENST00000525825,ENST00000528974,ENST00000529871,ENST00000532520,ENST00000533400,uc001pig.2,uc001pik.2,uc001pim.3,uc009yxi.2,uc009yxj.2,uc010rvj.1,uc010rvk.1,uc010rvl.1_5end | |association_with_transcript=0bp_to_ENST00000525825,ENST00000528974,ENST00000529871,ENST00000532520,ENST00000533400,uc001pig.2,uc001pik.2,uc001pim.3,uc009yxi.2,uc009yxj.2,uc010rvj.1,uc010rvk.1,uc010rvl.1_5end | ||
|cluster_id=chr11:104905868..104905889,- | |cluster_id=chr11:104905868..104905889,- | ||
Latest revision as of 20:44, 24 September 2015
| Short description: | p1@CASP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CASP1_5end |
| Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
| Association with transcript: | 0bp_to_ENST00000525825, ENST00000528974, ENST00000529871, ENST00000532520, ENST00000533400, uc001pig.2, uc001pik.2, uc001pim.3, uc009yxi.2, uc009yxj.2, uc010rvj.1, uc010rvk.1, uc010rvl.1_5end |
| EntrezGene: | CASP1 |
| HGNC: | 1499 |
| UniProt: | B4DVD8Q5FBZ0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CASP1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| nongranular leukocyte | 1.71e-44 | 115 |
| leukocyte | 1.32e-41 | 136 |
| monopoietic cell | 2.70e-36 | 59 |
| monocyte | 2.70e-36 | 59 |
| monoblast | 2.70e-36 | 59 |
| promonocyte | 2.70e-36 | 59 |
| hematopoietic lineage restricted progenitor cell | 5.14e-36 | 120 |
| myeloid leukocyte | 2.56e-35 | 72 |
| macrophage dendritic cell progenitor | 3.39e-35 | 61 |
| defensive cell | 7.53e-34 | 48 |
Showing 1 to 10 of 31 entries
| Ontology term | p-value | n |
|---|---|---|
| hemolymphoid system | 7.36e-32 | 108 |
| hematopoietic system | 4.25e-31 | 98 |
| blood island | 4.25e-31 | 98 |
| immune system | 1.33e-27 | 93 |
| bone marrow | 5.31e-25 | 76 |
| bone element | 3.12e-21 | 82 |
| skeletal element | 8.40e-21 | 90 |
| skeletal system | 1.20e-18 | 100 |
| musculoskeletal system | 4.93e-07 | 167 |
| lateral plate mesoderm | 5.08e-07 | 203 |
Showing 1 to 10 of 10 entries
