FFCP PHASE1:Hg19::chr14:61191018..61191048,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51804 | |EntrezGene=51804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10890 | |HGNC=10890 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010app.1_5end | |association_with_transcript=0bp_to_uc010app.1_5end | ||
|cluster_id=chr14:61191018..61191048,- | |||
|description=CAGE_peak_1_at_SIX4_5end | |description=CAGE_peak_1_at_SIX4_5end | ||
|id=chr14:61191018..61191048,- | |id=chr14:61191018..61191048,- | ||
|ontology_enrichment_celltype=CL:0000055!1.18e-12!180;CL:0000066!2.42e-10!254 | |ontology_enrichment_celltype=CL:0000055!1.18e-12!180;CL:0000066!2.42e-10!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.90e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.71e-16!143;DOID:305!4.43e-15!106;DOID:162!4.52e-07!235;DOID:14566!7.77e-07!239 | |ontology_enrichment_disease=DOID:0050687!2.71e-16!143;DOID:305!4.43e-15!106;DOID:162!4.52e-07!235;DOID:14566!7.77e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.14e-14,143;DOID:305,9.08e-14,106 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.19e-17!365;UBERON:0000481!5.81e-14!347;UBERON:0002100!5.00e-13!216;UBERON:0003104!2.90e-11!238;UBERON:0009142!2.90e-11!238;UBERON:0004119!3.53e-09!169;UBERON:0000925!3.53e-09!169;UBERON:0006595!3.53e-09!169;UBERON:0000914!7.77e-09!83;UBERON:0002329!7.77e-09!83;UBERON:0003077!7.77e-09!83;UBERON:0003059!7.77e-09!83;UBERON:0007282!7.77e-09!83;UBERON:0009618!7.77e-09!83;UBERON:0007285!7.77e-09!83;UBERON:0000119!1.03e-08!312;UBERON:0000486!1.13e-08!82;UBERON:0001444!1.24e-08!48;UBERON:0005256!1.67e-08!143;UBERON:0003102!2.04e-08!95;UBERON:0001007!4.07e-08!155;UBERON:0001555!4.07e-08!155;UBERON:0007026!4.07e-08!155;UBERON:0000483!4.08e-08!309;UBERON:0000468!8.46e-08!659;UBERON:0000161!1.02e-07!35;UBERON:0001048!1.52e-07!168;UBERON:0004290!3.64e-07!70 | |ontology_enrichment_uberon=UBERON:0000475!3.19e-17!365;UBERON:0000481!5.81e-14!347;UBERON:0002100!5.00e-13!216;UBERON:0003104!2.90e-11!238;UBERON:0009142!2.90e-11!238;UBERON:0004119!3.53e-09!169;UBERON:0000925!3.53e-09!169;UBERON:0006595!3.53e-09!169;UBERON:0000914!7.77e-09!83;UBERON:0002329!7.77e-09!83;UBERON:0003077!7.77e-09!83;UBERON:0003059!7.77e-09!83;UBERON:0007282!7.77e-09!83;UBERON:0009618!7.77e-09!83;UBERON:0007285!7.77e-09!83;UBERON:0000119!1.03e-08!312;UBERON:0000486!1.13e-08!82;UBERON:0001444!1.24e-08!48;UBERON:0005256!1.67e-08!143;UBERON:0003102!2.04e-08!95;UBERON:0001007!4.07e-08!155;UBERON:0001555!4.07e-08!155;UBERON:0007026!4.07e-08!155;UBERON:0000483!4.08e-08!309;UBERON:0000468!8.46e-08!659;UBERON:0000161!1.02e-07!35;UBERON:0001048!1.52e-07!168;UBERON:0004290!3.64e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.71e-08;31!UBERON:0001015;1.71e-08;31!UBERON:0000383;1.71e-08;31!UBERON:0001134;3.05e-07;16!UBERON:0002036;3.05e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,5.55e-10,199;UBERON:0000486,2.65e-09,83;UBERON:0000161,1.88e-08,36;UBERON:0007524,2.96e-08,73;UBERON:0001444,4.76e-08,49;UBERON:0002329,6.81e-08,71;UBERON:0003059,6.81e-08,71;UBERON:0007282,6.81e-08,71;UBERON:0004290,6.81e-08,71;UBERON:0009618,6.81e-08,71;UBERON:0003102,6.99e-08,99;UBERON:0003077,7.40e-08,72;UBERON:0007285,7.40e-08,72;UBERON:0005256,7.71e-08,122;UBERON:0007503,7.74e-07,78;UBERON:0000033,8.49e-07,56;UBERON:0001134,8.53e-07,62;UBERON:0002036,8.53e-07,62;UBERON:0003082,8.53e-07,62 | |||
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| ||
|short_description=p1@SIX4 | |short_description=p1@SIX4 | ||
}} | }} |
Latest revision as of 21:03, 24 September 2015
Short description: | p1@SIX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIX4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010app.1_5end |
EntrezGene: | SIX4 |
HGNC: | 10890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.90e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
trunk | 5.55e-10 | 199 |
multilaminar epithelium | 2.65e-09 | 83 |
orifice | 1.88e-08 | 36 |
dense mesenchyme tissue | 2.96e-08 | 73 |
subdivision of head | 4.76e-08 | 49 |
somite | 6.81e-08 | 71 |
presomitic mesoderm | 6.81e-08 | 71 |
presumptive segmental plate | 6.81e-08 | 71 |
dermomyotome | 6.81e-08 | 71 |
trunk paraxial mesoderm | 6.81e-08 | 71 |
surface structure | 6.99e-08 | 99 |
paraxial mesoderm | 7.40e-08 | 72 |
presumptive paraxial mesoderm | 7.40e-08 | 72 |
trunk mesenchyme | 7.71e-08 | 122 |
epithelial vesicle | 7.74e-07 | 78 |
head | 8.49e-07 | 56 |
skeletal muscle tissue | 8.53e-07 | 62 |
striated muscle tissue | 8.53e-07 | 62 |
myotome | 8.53e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.14e-14 | 143 |
carcinoma | 9.08e-14 | 106 |