FFCP PHASE1:Hg19::chr19:7698377..7698384,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126006 | |EntrezGene=126006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30209 | |HGNC=30209 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVA1 | |UniProt=Q8IVA1 | ||
|association_with_transcript=185bp_to_ENST00000311069,NM_174895,uc002mgz.2_5end | |association_with_transcript=185bp_to_ENST00000311069,NM_174895,uc002mgz.2_5end | ||
|cluster_id=chr19:7698377..7698384,- | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_2_at_PCP2_5end | |description=CAGE_peak_2_at_PCP2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.52e-87;3!UBERON:0006238;2.63e-07;10 | |ontology_enrichment_development_v019=UBERON:0003056;1.52e-87;3!UBERON:0006238;2.63e-07;10 | ||
|ontology_enrichment_disease=DOID:5093!2.11e-08!4;DOID:1612!2.11e-08!4 | |ontology_enrichment_disease=DOID:5093!2.11e-08!4;DOID:1612!2.11e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:3093;8.38e-07;11 | |ontology_enrichment_disease_v019=DOID:3093;8.38e-07;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,8.38e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.02e-23!5;UBERON:0005388!1.02e-23!5;UBERON:0001802!1.02e-23!5;UBERON:0003127!2.74e-15!2;UBERON:0000970!1.43e-13!20;UBERON:0002104!5.82e-13!21;UBERON:0000020!6.73e-12!23;UBERON:0001032!1.97e-11!24;UBERON:0004456!1.97e-11!24;UBERON:0000019!5.66e-07!19;UBERON:0000047!5.66e-07!19;UBERON:0004088!5.66e-07!19;UBERON:0003072!5.66e-07!19;UBERON:0003071!5.66e-07!19;UBERON:0004128!5.66e-07!19 | |ontology_enrichment_uberon=UBERON:0000966!1.02e-23!5;UBERON:0005388!1.02e-23!5;UBERON:0001802!1.02e-23!5;UBERON:0003127!2.74e-15!2;UBERON:0000970!1.43e-13!20;UBERON:0002104!5.82e-13!21;UBERON:0000020!6.73e-12!23;UBERON:0001032!1.97e-11!24;UBERON:0004456!1.97e-11!24;UBERON:0000019!5.66e-07!19;UBERON:0000047!5.66e-07!19;UBERON:0004088!5.66e-07!19;UBERON:0003072!5.66e-07!19;UBERON:0003071!5.66e-07!19;UBERON:0004128!5.66e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.74e-53;5!UBERON:0005388;3.74e-53;5!UBERON:0001802;3.74e-53;5!UBERON:0000970;1.56e-30;20!UBERON:0002104;3.84e-29;21!UBERON:0000020;1.01e-26;23!UBERON:0001032;1.16e-25;24!UBERON:0004456;1.16e-25;24!UBERON:0000019;5.66e-15;19!UBERON:0000047;5.66e-15;19!UBERON:0004088;5.66e-15;19!UBERON:0010230;5.66e-15;19!UBERON:0001456;1.16e-13;21 | |ontology_enrichment_uberon_v019=UBERON:0000966;3.74e-53;5!UBERON:0005388;3.74e-53;5!UBERON:0001802;3.74e-53;5!UBERON:0000970;1.56e-30;20!UBERON:0002104;3.84e-29;21!UBERON:0000020;1.01e-26;23!UBERON:0001032;1.16e-25;24!UBERON:0004456;1.16e-25;24!UBERON:0000019;5.66e-15;19!UBERON:0000047;5.66e-15;19!UBERON:0004088;5.66e-15;19!UBERON:0010230;5.66e-15;19!UBERON:0001456;1.16e-13;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.52e-44,6;UBERON:0005388,1.52e-44,6;UBERON:0001802,1.52e-44,6;UBERON:0000970,3.84e-29,21;UBERON:0002104,3.84e-29,21;UBERON:0000020,1.16e-25,24;UBERON:0001032,1.16e-25,24;UBERON:0004456,1.16e-25,24;UBERON:0000019,2.76e-14,20;UBERON:0000047,2.76e-14,20;UBERON:0010312,2.76e-14,20;UBERON:0004088,2.76e-14,20;UBERON:0010230,2.76e-14,20;UBERON:0003072,2.76e-14,20;UBERON:0004128,2.76e-14,20;UBERON:0003071,2.76e-14,20;UBERON:0001456,4.26e-13,22;UBERON:0005085,1.25e-09,31 | |||
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|short_description=p2@PCP2 | |short_description=p2@PCP2 | ||
}} | }} |
Latest revision as of 21:08, 24 September 2015
Short description: | p2@PCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCP2_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 185bp_to_ENST00000311069, NM_174895, uc002mgz.2_5end |
EntrezGene: | PCP2 |
HGNC: | 30209 |
UniProt: | Q8IVA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 1.52e-44 | 6 |
photoreceptor array | 1.52e-44 | 6 |
posterior segment of eyeball | 1.52e-44 | 6 |
eye | 3.84e-29 | 21 |
visual system | 3.84e-29 | 21 |
sense organ | 1.16e-25 | 24 |
sensory system | 1.16e-25 | 24 |
entire sense organ system | 1.16e-25 | 24 |
camera-type eye | 2.76e-14 | 20 |
simple eye | 2.76e-14 | 20 |
immature eye | 2.76e-14 | 20 |
ocular region | 2.76e-14 | 20 |
eyeball of camera-type eye | 2.76e-14 | 20 |
optic cup | 2.76e-14 | 20 |
optic vesicle | 2.76e-14 | 20 |
eye primordium | 2.76e-14 | 20 |
face | 4.26e-13 | 22 |
ectodermal placode | 1.25e-09 | 31 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 8.38e-07 | 11 |