FFCP PHASE1:Hg19::chr11:10590118..10590129,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10894 | |EntrezGene=10894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14687 | |HGNC=14687 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z296 | |UniProt=F2Z296 | ||
|association_with_transcript=0bp_to_ENST00000529598_5end | |association_with_transcript=0bp_to_ENST00000529598_5end | ||
|cluster_id=chr11:10590118..10590129,- | |||
|coexpression_cluster_id=C2091 | |coexpression_cluster_id=C2091 | ||
|description=CAGE_peak_5_at_LYVE1_5end | |description=CAGE_peak_5_at_LYVE1_5end | ||
|id=chr11:10590118..10590129,- | |id=chr11:10590118..10590129,- | ||
|ontology_enrichment_celltype=CL:0000115!4.23e-13!35;CL:0002139!2.77e-10!24;CL:0002078!3.71e-09!44;CL:0000071!1.86e-07!18;CL:0002546!1.86e-07!18 | |ontology_enrichment_celltype=CL:0000115!4.23e-13!35;CL:0002139!2.77e-10!24;CL:0002078!3.71e-09!44;CL:0000071!1.86e-07!18;CL:0002546!1.86e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.68e-10;36!CL:0002144;2.40e-08;3!CL:0002188;6.39e-08;5!CL:0002139;6.91e-08;24!CL:0002618;4.95e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.25e-13,36;CL:0002078,1.83e-09,45;CL:0002144,2.50e-08,3;CL:0002188,5.45e-08,5;CL:0002139,6.67e-08,24;CL:0002618,5.07e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.42e-12;7!UBERON:0006603;3.14e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.03e-66!115;UBERON:0001049!2.24e-21!57;UBERON:0005068!2.24e-21!57;UBERON:0006241!2.24e-21!57;UBERON:0007135!2.24e-21!57;UBERON:0004111!3.65e-21!241;UBERON:0000025!2.37e-19!194;UBERON:0000477!1.45e-18!286;UBERON:0003080!2.57e-17!42;UBERON:0003075!4.56e-17!86;UBERON:0007284!4.56e-17!86;UBERON:0002616!1.61e-16!59;UBERON:0002780!3.08e-16!41;UBERON:0001890!3.08e-16!41;UBERON:0006240!3.08e-16!41;UBERON:0002346!9.33e-16!90;UBERON:0001017!4.22e-14!82;UBERON:0005743!8.11e-14!86;UBERON:0000955!2.42e-13!69;UBERON:0006238!2.42e-13!69;UBERON:0001893!5.99e-13!34;UBERON:0000073!2.46e-12!94;UBERON:0001016!2.46e-12!94;UBERON:0002791!2.87e-12!33;UBERON:0002020!7.18e-12!34;UBERON:0003528!7.18e-12!34;UBERON:0001869!1.99e-11!32;UBERON:0000483!3.72e-11!309;UBERON:0000119!7.71e-11!312;UBERON:0002619!1.89e-10!22;UBERON:0003056!2.17e-10!61;UBERON:0000468!3.71e-09!659;UBERON:0001950!7.24e-09!20;UBERON:0000481!8.94e-09!347;UBERON:0000956!9.06e-09!25;UBERON:0000203!9.06e-09!25;UBERON:0000467!2.08e-08!625;UBERON:0000480!2.43e-08!626;UBERON:0003103!2.88e-08!69;UBERON:0000064!3.46e-08!219;UBERON:0000153!3.75e-08!129;UBERON:0007811!3.75e-08!129;UBERON:0001986!1.86e-07!18;UBERON:0004638!1.86e-07!18;UBERON:0004852!1.86e-07!18;UBERON:0000062!2.23e-07!511;UBERON:0000033!3.38e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!6.03e-66!115;UBERON:0001049!2.24e-21!57;UBERON:0005068!2.24e-21!57;UBERON:0006241!2.24e-21!57;UBERON:0007135!2.24e-21!57;UBERON:0004111!3.65e-21!241;UBERON:0000025!2.37e-19!194;UBERON:0000477!1.45e-18!286;UBERON:0003080!2.57e-17!42;UBERON:0003075!4.56e-17!86;UBERON:0007284!4.56e-17!86;UBERON:0002616!1.61e-16!59;UBERON:0002780!3.08e-16!41;UBERON:0001890!3.08e-16!41;UBERON:0006240!3.08e-16!41;UBERON:0002346!9.33e-16!90;UBERON:0001017!4.22e-14!82;UBERON:0005743!8.11e-14!86;UBERON:0000955!2.42e-13!69;UBERON:0006238!2.42e-13!69;UBERON:0001893!5.99e-13!34;UBERON:0000073!2.46e-12!94;UBERON:0001016!2.46e-12!94;UBERON:0002791!2.87e-12!33;UBERON:0002020!7.18e-12!34;UBERON:0003528!7.18e-12!34;UBERON:0001869!1.99e-11!32;UBERON:0000483!3.72e-11!309;UBERON:0000119!7.71e-11!312;UBERON:0002619!1.89e-10!22;UBERON:0003056!2.17e-10!61;UBERON:0000468!3.71e-09!659;UBERON:0001950!7.24e-09!20;UBERON:0000481!8.94e-09!347;UBERON:0000956!9.06e-09!25;UBERON:0000203!9.06e-09!25;UBERON:0000467!2.08e-08!625;UBERON:0000480!2.43e-08!626;UBERON:0003103!2.88e-08!69;UBERON:0000064!3.46e-08!219;UBERON:0000153!3.75e-08!129;UBERON:0007811!3.75e-08!129;UBERON:0001986!1.86e-07!18;UBERON:0004638!1.86e-07!18;UBERON:0004852!1.86e-07!18;UBERON:0000062!2.23e-07!511;UBERON:0000033!3.38e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.40e-08;3!UBERON:0001915;2.40e-08;3!UBERON:0001982;2.40e-08;3!UBERON:0000922;1.58e-07;49!UBERON:0004151;2.12e-07;3!UBERON:0007023;2.15e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.89e-34,114;UBERON:0004111,4.69e-10,240;UBERON:0003887,4.13e-09,12;UBERON:0010523,2.50e-08,3;UBERON:0001915,2.50e-08,3;UBERON:0001982,2.50e-08,3;UBERON:0000025,2.68e-08,192;UBERON:0004151,2.35e-07,3;UBERON:0003103,3.11e-07,68;UBERON:0005103,3.35e-07,8;UBERON:0000083,3.35e-07,8;UBERON:0009201,3.35e-07,8;UBERON:0006553,3.35e-07,8;UBERON:0003074,3.35e-07,8;UBERON:0003060,3.35e-07,8;UBERON:0004921,6.72e-07,118 | |||
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|short_description=p5@LYVE1 | |short_description=p5@LYVE1 | ||
}} | }} |
Latest revision as of 21:37, 24 September 2015
Short description: | p5@LYVE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LYVE1_5end |
Coexpression cluster: | C2091_Hepatic_spleen_Endothelial_lung_lymph_adipose_acute |
Association with transcript: | 0bp_to_ENST00000529598_5end |
EntrezGene: | LYVE1 |
HGNC: | 14687 |
UniProt: | F2Z296 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.25e-13 | 36 |
meso-epithelial cell | 1.83e-09 | 45 |
capillary endothelial cell | 2.50e-08 | 3 |
glomerular endothelial cell | 5.45e-08 | 5 |
endothelial cell of vascular tree | 6.67e-08 | 24 |
endothelial cell of umbilical vein | 5.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.89e-34 | 114 |
anatomical conduit | 4.69e-10 | 240 |
intraembryonic coelom | 4.13e-09 | 12 |
microcirculatory vessel | 2.50e-08 | 3 |
endothelium of capillary | 2.50e-08 | 3 |
capillary | 2.50e-08 | 3 |
tube | 2.68e-08 | 192 |
cardiac chamber | 2.35e-07 | 3 |
compound organ | 3.11e-07 | 68 |
mesonephric epithelium | 3.35e-07 | 8 |
mesonephric tubule | 3.35e-07 | 8 |
nephric duct | 3.35e-07 | 8 |
renal duct | 3.35e-07 | 8 |
mesonephric duct | 3.35e-07 | 8 |
pronephric duct | 3.35e-07 | 8 |
subdivision of digestive tract | 6.72e-07 | 118 |