FFCP PHASE1:Hg19::chr2:220436126..220436210,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:220436126..220436210,-
|short_description=p1@OBSL1
|description=CAGE_peak_1_at_OBSL1_5end
|association_with_transcript=0bp_to_ENST00000289656,uc002vmj.2_5e...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23363 | |EntrezGene=23363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29092 | |HGNC=29092 | ||
|TSSclassifier=strong | |||
|UniProt=A8MSZ8 | |UniProt=A8MSZ8 | ||
|association_with_transcript=0bp_to_ENST00000289656,uc002vmj.2_5end | |||
|cluster_id=chr2:220436126..220436210,- | |||
|description=CAGE_peak_1_at_OBSL1_5end | |||
|id=chr2:220436126..220436210,- | |||
|ontology_enrichment_celltype=CL:0000055!2.62e-16!180;CL:0000325!1.93e-07!39;CL:0000133!3.94e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,5.40e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.59e-14!365;UBERON:0000481!3.89e-11!347;UBERON:0000468!9.57e-10!659;UBERON:0002100!2.00e-09!216;UBERON:0000483!4.67e-09!309;UBERON:0000119!5.31e-09!312;UBERON:0001048!1.45e-07!168;UBERON:0007100!1.87e-07!27;UBERON:0000477!1.88e-07!286;UBERON:0003103!2.17e-07!69;UBERON:0009569!3.00e-07!113;UBERON:0005256!3.71e-07!143;UBERON:0000025!3.88e-07!194;UBERON:0003914!9.83e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.19e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,9.79e-10,160;UBERON:0009142,9.79e-10,160;UBERON:0000483,3.61e-09,306;UBERON:0000119,4.12e-09,309;UBERON:0002100,5.37e-09,199;UBERON:0001048,7.19e-08,160;UBERON:0007100,1.72e-07,27;UBERON:0003103,1.77e-07,68;UBERON:0009569,3.09e-07,112;UBERON:0000025,5.80e-07,192;UBERON:0003914,9.12e-07,117 | |||
|phase1_expression=23.4365109259018,29.9740733447376,19.8745709775319,48.0351832095026,33.5220820820466,24.4254786748103,20.2639902534648,10.1075179748293,17.2382514611893,6.14334841253772,18.8406315352555,10.2667444901181,11.8695140202804,11.1389717664042,20.8780346708587,4.70627602516243,5.42425075221579,5.84248072309899,13.6621183661342,24.6242116153576,26.5200898617529,32.5992910337211,14.884271330815,17.3830519842563,18.5803106600308,0,0,0,1.57345710739562,0.383829398097213,0.309632246632152,9.19421224478927,6.32532429434325,2.58827807116751,0,0,14.0928210880727,0,0,0.217010870715852,0.447830948479849,0.32389366601898,0.515151135268373,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5737062863221,3.92355994087075,6.05783394982677,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,97.5227465255847,20.7917266508127,14.959919735693,6.14446559053763,23.0615438892509,15.4985775288081,3.1811437882044,33.5778060508819,12.1004565970007,14.8558696299918,13.8778961395139,14.7351459934927,3.27865759463288,4.82019775619758,0.97364218096405,0.522389211897802,0.797747763113191,1.19245312152671,0.571994910780128,0.371457501329565,2.78267370313387,6.02164216574287,7.28995053375948,6.78369530308812,12.1654836500873,6.60283300656162,2.92592953151535,1.03366703667732,1.06729878806013,0.66944122552934,8.45941565929209,6.0821768457481,16.3521578557274,2.94130464276695,6.48113558305408,3.75058858793135,5.16417557040191,2.59006405111641,4.5994991239765,3.79706263827252,5.1296488300514,0,0,5.23312862571041,7.9515512271251,7.85109172320394,10.8575528266839,14.3418310374407,8.51204117276057,16.8203280042692,7.47242970107935,12.5800449692752,17.7390290177867,6.60082293141472,9.31732847746715,14.6816704815583,14.98057403648,6.32667865951251,2.49728061464256,7.41613368007784,5.08125513876124,4.81481444439436,4.53244244230768,3.65172097425846,3.26646674007829,6.63305313483547,5.26961483996404,10.6920257155385,13.8469480395992,4.55080680969013,17.2468354035897,2.35670559535693,5.38009635449446,3.60183350129438,12.2913733846635,11.6465362403627,12.3195208303409,5.78504134116107,14.5305604907978,10.4643120521098,8.26534414522291,17.1051924768109,9.2747276314595,24.7334918443804,9.1197259602479,11.3080142601648,9.93857452644226,23.4763410047026,9.66523935744143,12.6083924318673,14.5553932931812,5.23910910783729,11.5301202771132,2.31913023795956,2.72746120590835,2.00763216772303,15.0027658539402,9.54214331914694,15.3376004587764,15.1345140322441,13.8776467981596,8.75945661781992,14.0804579096834,29.5890831568727,17.9575397758225,15.3241416250553,5.0531563716871,10.7659188036258,11.632343615389,7.47134192638794,11.470573164169,11.5476105368975,6.40630671599961,9.30336026305134,9.61485179114196,5.00171304030308,9.59602091012043,8.41450642820675,27.1638847478724,35.2820907325301,15.2106041786197,8.84544495009863,9.45263850690247,0.441463099414651,5.16551441881077,9.26466175612038,3.29250856225877,3.37205259772859,1.91005047582099,3.61094936118265,1.95484983186195,8.31947828223663,5.77325368101093,9.73815401790645,5.87043471179108,6.20775725372617,5.09284063834272,8.18092854608773,16.5942923571448,24.8960987007513,0.492434012174795,0.234004265139238,0.594524649154913,2.81201501960331,2.35174979478403,1.98485136139341,2.14940454486836,1.74380363108377,9.20118429996507,0,0.264145302039678,8.70778085271243,14.2678753882792,5.6809095041871,8.06423257510547,22.1553286823801,38.6817575793155,29.0823158238599,19.1259136428182,7.50857644609794,17.4354123904653,5.49442313292267,9.15516144549888,5.5737097223922,4.65378176728,50.0719024192635,10.988935783228,15.1584726453376,18.7213386440459,8.23063597638855,2.83698264046557,8.52550972851518,8.43570162583071,24.9605938480064,13.9950857252731,8.14340460734338,13.8602860009593,8.71147060226772,9.04318131178758,12.2014684204041,12.8965158624854,1.2162378064119,0.502257091432126,0,6.70949595376431,17.2292903751171,9.98458335285029,7.09428402671138,14.7942952236276,8.41586527227509,0,0,0,0,10.6719742173435,5.20559415430487,10.05275456611,9.88345965472658,3.18969375826582,0,0,0,15.9498939234882,23.5080144898048,9.76554085319048,22.0449113222656,10.8841683166269,18.6088849740043,10.7770101793296,14.4454127869305,20.4666753650386,8.27784570340039,8.63493278096067,12.3527342922941,6.77692192851046,20.363320376125,25.0494699381925,0.206768026122887,0,0,12.1251028578504,18.3078983461547,34.4724934395836,7.93944985020086,23.1727579664974,19.6462066103152,12.6857757763144,18.4214609664013,13.6725832972066,22.2627099667486,6.78522652731684,11.7190738706664,6.24166385704949,7.78881643775432,9.87788216909654,12.811101656712,8.62177822304125,0.828728900423067,5.74072240823034,5.28064387219479,11.5389485164293,12.1823895485001,4.6979355633693,23.5304930753057,13.1525302187935,4.85537492907228,5.68666920354483,1.70093705276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| ||
|short_description=p1@OBSL1 | |||
}} | }} |
Latest revision as of 21:57, 24 September 2015
Short description: | p1@OBSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OBSL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000289656, uc002vmj.2_5end |
EntrezGene: | OBSL1 |
HGNC: | 29092 |
UniProt: | A8MSZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 5.40e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 9.79e-10 | 160 |
entire embryonic mesenchyme | 9.79e-10 | 160 |
epithelium | 3.61e-09 | 306 |
cell layer | 4.12e-09 | 309 |
trunk | 5.37e-09 | 199 |
primordium | 7.19e-08 | 160 |
primary circulatory organ | 1.72e-07 | 27 |
compound organ | 1.77e-07 | 68 |
subdivision of trunk | 3.09e-07 | 112 |
tube | 5.80e-07 | 192 |
epithelial tube | 9.12e-07 | 117 |