FFCP PHASE1:Hg19::chr11:107729543..107729569,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:107729543..107729569,-
|short_description=p4@SLC35F2
|description=CAGE_peak_4_at_SLC35F2_5end
|association_with_transcript=-9bp_to_ENST00000533664_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54733 | |EntrezGene=54733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23615 | |HGNC=23615 | ||
|TSSclassifier=strong | |||
|UniProt=E9PRY2 | |UniProt=E9PRY2 | ||
|association_with_transcript=-9bp_to_ENST00000533664_5end | |||
|cluster_id=chr11:107729543..107729569,- | |||
|description=CAGE_peak_4_at_SLC35F2_5end | |||
|id=chr11:107729543..107729569,- | |||
|ontology_enrichment_celltype=CL:0000066!1.02e-31!254;CL:0002076!7.54e-11!43;CL:0002321!1.11e-10!248;CL:0000220!2.32e-10!246;CL:0000223!6.97e-09!59;CL:0000076!3.10e-08!62;CL:0002368!9.38e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.96e-08;42!CL:0002368;1.91e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.31e-31,253;CL:0002076,3.99e-12,42;CL:0000223,1.26e-09,58;CL:0002321,2.72e-09,250;CL:0002368,1.70e-07,13;CL:0000076,2.42e-07,63;CL:0000071,7.59e-07,18;CL:0002546,7.59e-07,18;CL:0000213,9.67e-07,58;CL:0000215,9.67e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.14e-23!235;DOID:14566!9.74e-23!239;DOID:0050687!1.39e-17!143;DOID:305!2.24e-15!106;DOID:0050686!3.46e-10!137;DOID:299!5.15e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;9.39e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.54e-19,235;DOID:14566,7.24e-19,239;DOID:0050687,1.07e-15,143;DOID:305,1.49e-13,106;DOID:0050686,1.02e-08,137;DOID:299,3.41e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.61e-11!169;UBERON:0000925!1.61e-11!169;UBERON:0006595!1.61e-11!169;UBERON:0003104!2.02e-10!238;UBERON:0009142!2.02e-10!238;UBERON:0000464!3.83e-10!104;UBERON:0001004!5.47e-10!72;UBERON:0001007!1.73e-09!155;UBERON:0001555!1.73e-09!155;UBERON:0007026!1.73e-09!155;UBERON:0008947!2.55e-08!38;UBERON:0003258!2.55e-08!38;UBERON:0000487!3.24e-08!22;UBERON:0004921!4.43e-08!129;UBERON:0004185!4.43e-08!129;UBERON:0000065!8.80e-08!53;UBERON:0000077!1.13e-07!130;UBERON:0000481!2.02e-07!347;UBERON:0000466!5.27e-07!126;UBERON:0000072!6.72e-07!46;UBERON:0006914!8.96e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.61e-08;22!UBERON:0000490;4.07e-08;33!UBERON:0006554;1.69e-07;30!UBERON:0001008;1.69e-07;30!UBERON:0005911;3.01e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,3.68e-09,22;UBERON:0004119,1.11e-08,160;UBERON:0000925,1.11e-08,160;UBERON:0006595,1.11e-08,160;UBERON:0001004,4.02e-08,74;UBERON:0008947,8.63e-08,38;UBERON:0003258,8.63e-08,38;UBERON:0001007,3.95e-07,145;UBERON:0001555,3.95e-07,145;UBERON:0007026,3.95e-07,145;UBERON:0006914,5.22e-07,25;UBERON:0004638,7.59e-07,18;UBERON:0001986,7.59e-07,18;UBERON:0004852,7.59e-07,18 | |||
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| ||
|short_description=p4@SLC35F2 | |||
}} | }} |
Latest revision as of 22:54, 24 September 2015
Short description: | p4@SLC35F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC35F2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000533664_5end |
EntrezGene: | SLC35F2 |
HGNC: | 23615 |
UniProt: | E9PRY2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.31e-31 | 253 |
endo-epithelial cell | 3.99e-12 | 42 |
endodermal cell | 1.26e-09 | 58 |
embryonic cell | 2.72e-09 | 250 |
respiratory epithelial cell | 1.70e-07 | 13 |
squamous epithelial cell | 2.42e-07 | 63 |
blood vessel endothelial cell | 7.59e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.59e-07 | 18 |
lining cell | 9.67e-07 | 58 |
barrier cell | 9.67e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 3.68e-09 | 22 |
endoderm-derived structure | 1.11e-08 | 160 |
endoderm | 1.11e-08 | 160 |
presumptive endoderm | 1.11e-08 | 160 |
respiratory system | 4.02e-08 | 74 |
respiratory primordium | 8.63e-08 | 38 |
endoderm of foregut | 8.63e-08 | 38 |
digestive system | 3.95e-07 | 145 |
digestive tract | 3.95e-07 | 145 |
primitive gut | 3.95e-07 | 145 |
squamous epithelium | 5.22e-07 | 25 |
blood vessel endothelium | 7.59e-07 | 18 |
endothelium | 7.59e-07 | 18 |
cardiovascular system endothelium | 7.59e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.54e-19 | 235 |
disease of cellular proliferation | 7.24e-19 | 239 |
cell type cancer | 1.07e-15 | 143 |
carcinoma | 1.49e-13 | 106 |
organ system cancer | 1.02e-08 | 137 |
adenocarcinoma | 3.41e-08 | 25 |