FFCP PHASE1:Hg19::chr19:8117219..8117240,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6370 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10624 | |||
|TSSclassifier=strong | |||
|UniProt=A6NI52,O15444 | |||
|association_with_transcript=-405bp_to_NM_001201359,NM_005624,uc002mjc.3_5end | |||
|cluster_id=chr19:8117219..8117240,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_CCL25_5end | |||
|id=chr19:8117219..8117240,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.04e-10!24;CL:0000826!3.04e-10!24;CL:0000838!5.52e-07!52;CL:0000946!7.82e-07!1;CL:0000786!7.82e-07!1;CL:0000980!7.82e-07!1;CL:0000542!7.96e-07!53;CL:0000051!7.96e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;4.30e-11;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.95e-13!10;DOID:630!3.32e-07!1;DOID:0050177!3.32e-07!1;DOID:0050427!3.32e-07!1;DOID:2355!5.89e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;2.82e-21;1!DOID:0050177;2.82e-21;1!DOID:0050427;2.82e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.30e-21,1;DOID:0050177,2.30e-21,1;DOID:0050427,2.30e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!8.88e-13!7;UBERON:0005409!5.61e-11!35;UBERON:0002106!6.74e-08!3;UBERON:0004854!6.74e-08!3;UBERON:0009034!6.74e-08!3;UBERON:0002095!6.74e-08!3;UBERON:0004782!6.74e-08!3;UBERON:0003281!6.74e-08!3;UBERON:0009664!6.74e-08!3;UBERON:0002296!6.74e-08!3;UBERON:0005602!6.74e-08!3;UBERON:0001179!6.74e-08!3;UBERON:0006293!6.74e-08!3;UBERON:0004921!2.11e-07!129;UBERON:0004185!2.11e-07!129;UBERON:0002372!8.27e-07!1;UBERON:0001961!8.27e-07!1;UBERON:0001744!8.27e-07!1;UBERON:0001735!8.27e-07!1;UBERON:0001154!8.75e-07!1;UBERON:0001153!8.75e-07!1;UBERON:0000160!8.88e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.46e-40;2!UBERON:0005058;2.46e-40;2!UBERON:0009113;2.46e-40;2!UBERON:0002108;1.48e-36;4!UBERON:0000160;4.07e-18;17!UBERON:0004177;8.14e-17;5!UBERON:0005057;8.14e-17;5!UBERON:0005409;2.84e-14;22!UBERON:0004921;2.18e-08;33!UBERON:0002114;6.56e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.39e-36,4;UBERON:0002370,9.46e-21,4;UBERON:0005058,9.46e-21,4;UBERON:0009113,9.46e-21,4;UBERON:0003295,9.46e-21,4;UBERON:0005562,9.46e-21,4;UBERON:0000160,4.07e-18,17;UBERON:0003351,3.48e-14,6;UBERON:0005409,1.13e-12,25;UBERON:0004177,2.66e-12,7;UBERON:0005057,2.66e-12,7;UBERON:0000974,6.80e-09,10;UBERON:0003408,6.80e-09,10;UBERON:0001042,6.80e-09,10;UBERON:0009145,6.80e-09,10;UBERON:0006562,3.63e-08,11;UBERON:0009722,3.63e-08,11;UBERON:0007690,3.63e-08,11;UBERON:0002114,6.34e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657751618414705,0.829050053357545,1.15921234294021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68825091867698,0.611030144933625,0,0,0,0,0,0,0,0,0,0,6.04953580243319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677386656526276,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0.150962843566674,14.2772192499698,10.9279780251979,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,4.7612415646386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58806880327262,2.42091385753846,0,0,0,0,0,0.336760265072938,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.00636896795513,6.73193833836789 | |||
|short_description=p2@CCL25 | |||
}} |
Latest revision as of 23:12, 24 September 2015
Short description: | p2@CCL25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCL25_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -405bp_to_NM_001201359, NM_005624, uc002mjc.3_5end |
EntrezGene: | CCL25 |
HGNC: | 10624 |
UniProt: | A6NI52O15444 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.39e-36 | 4 |
thymus | 9.46e-21 | 4 |
hemolymphoid system gland | 9.46e-21 | 4 |
thymic region | 9.46e-21 | 4 |
pharyngeal gland | 9.46e-21 | 4 |
thymus primordium | 9.46e-21 | 4 |
intestine | 4.07e-18 | 17 |
pharyngeal epithelium | 3.48e-14 | 6 |
gastrointestinal system | 1.13e-12 | 25 |
hemopoietic organ | 2.66e-12 | 7 |
immune organ | 2.66e-12 | 7 |
neck | 6.80e-09 | 10 |
gland of gut | 6.80e-09 | 10 |
chordate pharynx | 6.80e-09 | 10 |
pharyngeal region of foregut | 6.80e-09 | 10 |
pharynx | 3.63e-08 | 11 |
entire pharyngeal arch endoderm | 3.63e-08 | 11 |
early pharyngeal endoderm | 3.63e-08 | 11 |
duodenum | 6.34e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.30e-21 | 1 |
monogenic disease | 2.30e-21 | 1 |
xeroderma pigmentosum | 2.30e-21 | 1 |