FFCP PHASE1:Hg19::chr11:108093699..108093710,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=472 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=795 | |||
|TSSclassifier=strong | |||
|UniProt=E9PIQ5 | |||
|association_with_transcript=-101bp_to_ENST00000527891_5end | |||
|cluster_id=chr11:108093699..108093710,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_7_at_ATM_5end | |||
|id=chr11:108093699..108093710,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.93e-19!53;CL:0000051!1.93e-19!53;CL:0000838!3.50e-19!52;CL:0000791!1.09e-13!18;CL:0000789!1.09e-13!18;CL:0002420!1.09e-13!18;CL:0002419!1.09e-13!18;CL:0000790!1.09e-13!18;CL:0000084!1.26e-11!25;CL:0000827!1.26e-11!25;CL:0000738!2.01e-10!140;CL:0002087!3.62e-10!119;CL:0000625!2.76e-09!11;CL:0002031!2.93e-08!124;CL:0000945!3.12e-07!24;CL:0000826!3.12e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.72e-37;18!CL:0000789;8.72e-37;18!CL:0002419;8.72e-37;18!CL:0000084;3.05e-25;25!CL:0000625;3.45e-24;11!CL:0000542;6.55e-20;53!CL:0000624;1.04e-16;6!CL:0000236;1.45e-12;13!CL:0000898;6.52e-09;3!CL:0000623;1.58e-08;3!CL:0000945;9.99e-08;24!CL:0002087;2.44e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.08e-37,18;CL:0000789,2.08e-37,18;CL:0002420,2.08e-37,18;CL:0002419,2.08e-37,18;CL:0000790,2.08e-37,18;CL:0000838,2.88e-35,52;CL:0000542,1.90e-34,53;CL:0000051,1.90e-34,53;CL:0000084,1.12e-25,25;CL:0000827,1.12e-25,25;CL:0000625,7.13e-25,11;CL:0000624,1.17e-16,6;CL:0002087,4.27e-16,115;CL:0000738,1.40e-15,136;CL:0002031,7.17e-13,120;CL:0000236,1.03e-11,14;CL:0000037,6.20e-11,168;CL:0000988,6.05e-10,177;CL:0000898,3.63e-09,3;CL:0000623,6.12e-09,3;CL:0000825,6.12e-09,3;CL:0002032,1.73e-08,161;CL:0000837,1.73e-08,161;CL:0000945,9.75e-08,24;CL:0000826,9.75e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000790;8.72e-37;18!CL:0000051;6.55e-20;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.54e-10!115;UBERON:0001049!5.14e-08!57;UBERON:0005068!5.14e-08!57;UBERON:0006241!5.14e-08!57;UBERON:0007135!5.14e-08!57;UBERON:0002346!8.33e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.38e-10;15!UBERON:0000179;1.38e-10;15!UBERON:0000463;1.38e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.38e-10,15;UBERON:0000179,2.38e-10,15;UBERON:0000463,2.38e-10,15 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.502170558379211,0.61130724598361,0.246301768349837,0.472264687882075,0.393364276848904,1.53531759238885,0.154816123316076,0,0,0,0.309868802321207,0.284338464974843,0.293600439334847,0,0.601633342410425,0.217010870715852,0.447830948479849,1.29557466407592,1.54545340580512,0,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0.838634582033504,0.112328631146495,0,0.48217676009124,0.285012743741249,0.39783335439818,0,1.75996244461323,4.91524750135918,0.889509253863555,1.28019066769952,1.60158394814405,1.14950487990897,0,0.954053754535364,6.26134266020393,1.17447437874188,2.6759125968766,0,0.560508562981536,0.263384084775077,3.73748563216283,3.14408610199332,1.02800749499755,1.17030546773475,2.28145586643513,0.946895611469467,1.94826728407911,1.00269411196656,1.47302953737419,1.55073726208535,2.43723477388514,0.768547918354051,0.780356085359269,1.15106533222573,1.10540007114339,1.15921234294021,2.66915813691709,3.21048993707656,2.09071047609954,1.0197840842781,1.53288197440768,1.03088233644789,2.78321661221453,2.54852331459277,3.90650072313851,0.950452044448374,3.16207750063323,3.07167866770604,6.24653632761729,1.89421801635213,1.64225599384209,1.41124720257313,1.33720097891754,1.44824403882799,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.087834785693126,0.196468613246569,0.364295288292542,0,0.649094787309367,0.348259474598534,0,0.953962497221368,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.267899184852239,0.44905874525234,0.225222960966644,0,0,0,0,0,0,0,0,0.264818361626438,1.14734648299525,0.354668382198357,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0,0.309157587715317,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0,0.484938170456436,0,0,0.169560592310488,0,0.545492241181669,0,0.487894824518382,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0,0,0,0.392442930250692,0,0.738155454624648,0,0,0,1.26755034821831,0,0,0,0,0.686271241194102,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0,0.207328115540772,0,0.6312121671319,0.380987365753014,1.14596527667483,0,0,0.308482478109971,0.300343057843917,0.857479297891735,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0.179060963239896,0.448340575974109,1.57624608161542,1.50939302401662,1.41177339907723,0,0,0,0.167516265334349,0,0.749007023947182,0,0.828831026872071,0.36807447515742,0,0.271265023699736,0,0.178428988797162,0,0.35142424497814,0,0,0,0,0,0,0,0,1.24060815673732,0.862856803274467,1.17400313583789,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0.522870902049801,0,0.328014645699706,0.325378394664303,0.412164046590889,0.183138929636687,0.165018999841176,0,0,1.6068392984416,0,0,0,0.275673144969061,0.214840489736547,0,0.0852266274161009,0,0,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,1.13929437434833,3.57347663186684,2.05681136543097,0.648473311192717,1.62009431171434,2.37937552888281,0.106824071127473,0,0,0.371606350251437,0,0.355709216742071,0.159426272728822,0.199579371432817,0,0.423347165447766,0,0,0,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0.293016358543788,0.242721043499027,0.111443384277478,0.568272293612826,0.23874448473769,0,0.614321404198464,0,0.281338832821026,0.111308705022906,0.16480387422676,0.211125408127993,0.19924798825107,1.38141957765574,0.251932747854276,0.102268682502155,0.123084805461069,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0,0,0,1.08536794762867,1.52581736317083,0.884634079449797,0.886642856860642,0.438770794307945,0.10893846351899,0.278847488557207,0.230850775511391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| |||
|short_description=p7@ATM | |||
}} |
Latest revision as of 23:12, 24 September 2015
Short description: | p7@ATM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ATM_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -101bp_to_ENST00000527891_5end |
EntrezGene: | ATM |
HGNC: | 795 |
UniProt: | E9PIQ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.08e-37 | 18 |
alpha-beta T cell | 2.08e-37 | 18 |
immature T cell | 2.08e-37 | 18 |
mature T cell | 2.08e-37 | 18 |
immature alpha-beta T cell | 2.08e-37 | 18 |
lymphoid lineage restricted progenitor cell | 2.88e-35 | 52 |
lymphocyte | 1.90e-34 | 53 |
common lymphoid progenitor | 1.90e-34 | 53 |
T cell | 1.12e-25 | 25 |
pro-T cell | 1.12e-25 | 25 |
CD8-positive, alpha-beta T cell | 7.13e-25 | 11 |
CD4-positive, alpha-beta T cell | 1.17e-16 | 6 |
nongranular leukocyte | 4.27e-16 | 115 |
leukocyte | 1.40e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 7.17e-13 | 120 |
B cell | 1.03e-11 | 14 |
hematopoietic stem cell | 6.20e-11 | 168 |
hematopoietic cell | 6.05e-10 | 177 |
naive T cell | 3.63e-09 | 3 |
natural killer cell | 6.12e-09 | 3 |
pro-NK cell | 6.12e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.73e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-08 | 161 |
lymphocyte of B lineage | 9.75e-08 | 24 |
pro-B cell | 9.75e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
blood | 2.38e-10 | 15 |
haemolymphatic fluid | 2.38e-10 | 15 |
organism substance | 2.38e-10 | 15 |