FFCP PHASE1:Hg19::chr16:2009500..2009584,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4716 | |EntrezGene=4716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7696 | |HGNC=7696 | ||
|TSSclassifier=strong | |||
|UniProt=O96000,Q96II6,A8K761 | |UniProt=O96000,Q96II6,A8K761 | ||
|association_with_transcript=0bp_to_ENST00000268668,ENST00000543683,NM_004548,uc002cni.2,uc002cnj.2_5end | |association_with_transcript=0bp_to_ENST00000268668,ENST00000543683,NM_004548,uc002cni.2,uc002cnj.2_5end | ||
|cluster_id=chr16:2009500..2009584,+ | |||
|coexpression_cluster_id=C3540 | |coexpression_cluster_id=C3540 | ||
|description=CAGE_peak_1_at_NDUFB10_5end | |description=CAGE_peak_1_at_NDUFB10_5end | ||
|id=chr16:2009500..2009584,+ | |id=chr16:2009500..2009584,+ | ||
|ontology_enrichment_celltype=CL:0000183!1.06e-11!59;CL:0000393!3.97e-10!60;CL:0000211!3.97e-10!60;CL:0000187!1.50e-09!54;CL:0000680!4.15e-09!57;CL:0000056!4.15e-09!57;CL:0000355!4.15e-09!57;CL:0000192!1.24e-08!42;CL:0000514!1.24e-08!42;CL:0000220!2.00e-08!246;CL:0002321!2.49e-08!248;CL:0000222!9.79e-08!119;CL:0000359!5.40e-07!32 | |ontology_enrichment_celltype=CL:0000183!1.06e-11!59;CL:0000393!3.97e-10!60;CL:0000211!3.97e-10!60;CL:0000187!1.50e-09!54;CL:0000680!4.15e-09!57;CL:0000056!4.15e-09!57;CL:0000355!4.15e-09!57;CL:0000192!1.24e-08!42;CL:0000514!1.24e-08!42;CL:0000220!2.00e-08!246;CL:0002321!2.49e-08!248;CL:0000222!9.79e-08!119;CL:0000359!5.40e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000192;8.89e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.14e-10,61;CL:0000211,2.14e-10,61;CL:0000187,8.08e-10,55;CL:0000680,2.27e-09,58;CL:0000056,2.27e-09,58;CL:0000355,2.27e-09,58;CL:0000192,6.65e-09,43;CL:0000514,6.65e-09,43;CL:0002321,9.94e-09,250;CL:0000222,3.41e-08,121;CL:0000359,5.40e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;8.89e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.29e-18!347;UBERON:0000914!2.01e-13!83;UBERON:0002329!2.01e-13!83;UBERON:0003077!2.01e-13!83;UBERON:0003059!2.01e-13!83;UBERON:0007282!2.01e-13!83;UBERON:0009618!2.01e-13!83;UBERON:0007285!2.01e-13!83;UBERON:0004290!3.51e-13!70;UBERON:0003104!3.65e-12!238;UBERON:0009142!3.65e-12!238;UBERON:0000483!4.23e-12!309;UBERON:0000119!6.26e-12!312;UBERON:0001134!4.39e-11!61;UBERON:0002036!4.39e-11!61;UBERON:0003082!4.39e-11!61;UBERON:0002385!5.26e-11!63;UBERON:0001015!5.26e-11!63;UBERON:0000383!5.26e-11!63;UBERON:0000475!5.72e-11!365;UBERON:0000486!6.05e-11!82;UBERON:0005256!2.44e-10!143;UBERON:0002100!1.18e-09!216;UBERON:0003103!1.37e-09!69;UBERON:0000025!2.47e-09!194;UBERON:0000477!4.59e-09!286;UBERON:0000064!6.00e-09!219;UBERON:0003914!2.17e-08!118;UBERON:0004872!2.34e-08!84;UBERON:0004111!5.64e-08!241;UBERON:0007100!1.73e-07!27;UBERON:0001981!5.89e-07!60;UBERON:0007500!5.89e-07!60;UBERON:0004537!5.89e-07!60;UBERON:0006965!5.89e-07!60;UBERON:0001637!6.01e-07!42;UBERON:0003509!6.01e-07!42;UBERON:0004572!6.01e-07!42 | |ontology_enrichment_uberon=UBERON:0000481!3.29e-18!347;UBERON:0000914!2.01e-13!83;UBERON:0002329!2.01e-13!83;UBERON:0003077!2.01e-13!83;UBERON:0003059!2.01e-13!83;UBERON:0007282!2.01e-13!83;UBERON:0009618!2.01e-13!83;UBERON:0007285!2.01e-13!83;UBERON:0004290!3.51e-13!70;UBERON:0003104!3.65e-12!238;UBERON:0009142!3.65e-12!238;UBERON:0000483!4.23e-12!309;UBERON:0000119!6.26e-12!312;UBERON:0001134!4.39e-11!61;UBERON:0002036!4.39e-11!61;UBERON:0003082!4.39e-11!61;UBERON:0002385!5.26e-11!63;UBERON:0001015!5.26e-11!63;UBERON:0000383!5.26e-11!63;UBERON:0000475!5.72e-11!365;UBERON:0000486!6.05e-11!82;UBERON:0005256!2.44e-10!143;UBERON:0002100!1.18e-09!216;UBERON:0003103!1.37e-09!69;UBERON:0000025!2.47e-09!194;UBERON:0000477!4.59e-09!286;UBERON:0000064!6.00e-09!219;UBERON:0003914!2.17e-08!118;UBERON:0004872!2.34e-08!84;UBERON:0004111!5.64e-08!241;UBERON:0007100!1.73e-07!27;UBERON:0001981!5.89e-07!60;UBERON:0007500!5.89e-07!60;UBERON:0004537!5.89e-07!60;UBERON:0006965!5.89e-07!60;UBERON:0001637!6.01e-07!42;UBERON:0003509!6.01e-07!42;UBERON:0004572!6.01e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.82e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.72e-16,78;UBERON:0007524,4.58e-14,73;UBERON:0003077,9.86e-14,72;UBERON:0007285,9.86e-14,72;UBERON:0002329,1.84e-13,71;UBERON:0003059,1.84e-13,71;UBERON:0007282,1.84e-13,71;UBERON:0004290,1.84e-13,71;UBERON:0009618,1.84e-13,71;UBERON:0000483,7.91e-13,306;UBERON:0000119,1.19e-12,309;UBERON:0003104,1.83e-12,160;UBERON:0009142,1.83e-12,160;UBERON:0001134,2.34e-11,62;UBERON:0002036,2.34e-11,62;UBERON:0003082,2.34e-11,62;UBERON:0002385,2.81e-11,64;UBERON:0001015,2.81e-11,64;UBERON:0000383,2.81e-11,64;UBERON:0000486,3.33e-11,83;UBERON:0005256,1.73e-09,122;UBERON:0003103,2.46e-09,68;UBERON:0000025,4.67e-09,192;UBERON:0002100,7.20e-09,199;UBERON:0004872,2.51e-08,83;UBERON:0003914,3.55e-08,117;UBERON:0004111,6.34e-08,240;UBERON:0007100,1.73e-07,27;UBERON:0000490,1.99e-07,148;UBERON:0010314,2.40e-07,132;UBERON:0001637,6.01e-07,42;UBERON:0003509,6.01e-07,42;UBERON:0004572,6.01e-07,42;UBERON:0007500,6.23e-07,59;UBERON:0001981,6.23e-07,59;UBERON:0004537,6.23e-07,59;UBERON:0006965,6.23e-07,59 | |||
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| ||
|short_description=p1@NDUFB10 | |short_description=p1@NDUFB10 | ||
}} | }} |
Latest revision as of 00:50, 25 September 2015
Short description: | p1@NDUFB10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NDUFB10_5end |
Coexpression cluster: | C3540_skeletal_left_heart_Mesenchymal_diaphragm_Alveolar_tongue |
Association with transcript: | 0bp_to_ENST00000268668, ENST00000543683, NM_004548, uc002cni.2, uc002cnj.2_5end |
EntrezGene: | NDUFB10 |
HGNC: | 7696 |
UniProt: | O96000Q96II6A8K761 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.14e-10 | 61 |
electrically active cell | 2.14e-10 | 61 |
muscle cell | 8.08e-10 | 55 |
muscle precursor cell | 2.27e-09 | 58 |
myoblast | 2.27e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.27e-09 | 58 |
smooth muscle cell | 6.65e-09 | 43 |
smooth muscle myoblast | 6.65e-09 | 43 |
embryonic cell | 9.94e-09 | 250 |
mesodermal cell | 3.41e-08 | 121 |
vascular associated smooth muscle cell | 5.40e-07 | 32 |