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UBERON:0010314

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Name:structure with developmental contribution from neural crest
Namespace:FANTOM
Definition:"An anatomical structure that has some part that develops from the neural crest." [UBERON:cjm]
Comments:Grouping term for query purposes
Subset: grouping_class

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000061(anatomical structure)



Children

is a:UBERON:0000007 (pituitary gland),UBERON:0000011 (parasympathetic nervous system),UBERON:0000019 (camera-type eye),UBERON:0000200 (gyrus),UBERON:0000391 (leptomeninx),UBERON:0000948 (heart),UBERON:0000956 (cerebral cortex),UBERON:0001133 (cardiac muscle tissue),UBERON:0001690 (ear),UBERON:0001708 (jaw skeleton),UBERON:0001723 (tongue),UBERON:0001736 (submandibular gland),UBERON:0001785 (cranial nerve),UBERON:0001831 (parotid gland),UBERON:0001846 (internal ear),UBERON:0001849 (membranous labyrinth),UBERON:0001855 (cochlear duct of membranous labyrinth),UBERON:0001869 (cerebral hemisphere),UBERON:0001891 (midbrain),UBERON:0001893 (telencephalon),UBERON:0001894 (diencephalon),UBERON:0001896 (medulla oblongata),UBERON:0002003 (peripheral nerve),UBERON:0002012 (pulmonary artery),UBERON:0002022 (insula),UBERON:0002028 (hindbrain),UBERON:0002046 (thyroid gland),UBERON:0002061 (truncus arteriosus),UBERON:0002067 (dermis),UBERON:0002073 (hair follicle),UBERON:0002227 (spiral organ of cochlea),UBERON:0002240 (spinal cord),UBERON:0002285 (telencephalic ventricle),UBERON:0002298 (brainstem),UBERON:0002307 (choroid plexus of lateral ventricle),UBERON:0002342 (neural crest),UBERON:0002360 (meninx),UBERON:0002473 (intercerebral commissure),UBERON:0002499 (cochlear labyrinth),UBERON:0002539 (pharyngeal arch),UBERON:0002680 (regional part of metencephalon),UBERON:0002791 (regional part of telencephalon),UBERON:0003023 (pontine tegmentum),UBERON:0003051 (ear vesicle),UBERON:0003099 (cranial neural crest),UBERON:0003129 (skull),UBERON:0003323 (mesenchyme of upper jaw),UBERON:0003672 (dentition),UBERON:0004363 (pharyngeal arch artery),UBERON:0004637 (otic capsule)... further results

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010314 (structure with developmental contribution from neural crest), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.57e-65FFCP PHASE1:Hg19::chr5:11588907..11588967,-#_c68106ca182c163df5207b88d3599dfcp3@CTNND2
5.57e-65FFCP PHASE2:Hg19::chr5:11588907..11588967,-#_c68106ca182c163df5207b88d3599dfcp3@CTNND2
5.76e-65FFCP PHASE1:Hg19::chr11:31839488..31839515,-#_d298cb98654b12c7fbffd309837da317p3@PAX6
5.76e-65FFCP PHASE2:Hg19::chr11:31839488..31839515,-#_d298cb98654b12c7fbffd309837da317p3@PAX6
2.24e-62FFCP PHASE1:Hg19::chr17:54230819..54230848,+#_afd3bb9550e9c1bfede491d879cba27bp1@ANKFN1
2.24e-62FFCP PHASE2:Hg19::chr17:54230819..54230848,+#_afd3bb9550e9c1bfede491d879cba27bp1@ANKFN1
5.05e-62FFCP PHASE2:Hg19::chr5:146314142..146314146,-#_193c4b6eda0837011a4889a28a6c37edp@chr5:146314142..146314146, -
5.05e-62FFCP PHASE1:Hg19::chr5:146314142..146314146,-#_193c4b6eda0837011a4889a28a6c37edp@chr5:146314142..146314146, -
1.12e-61FFCP PHASE1:Hg19::chr5:87439352..87439386,-#_be8eb1f112d928800b542b47a4297b56p@chr5:87439352..87439386, -
1.12e-61FFCP PHASE2:Hg19::chr5:87439352..87439386,-#_be8eb1f112d928800b542b47a4297b56p@chr5:87439352..87439386, -
1.51e-61FFCP PHASE2:Hg19::chr2:74612644..74612670,+#_2425a844350f6c85da8c37bb8b55aae1p1@ENST00000412957
1.51e-61FFCP PHASE1:Hg19::chr2:74612644..74612670,+#_2425a844350f6c85da8c37bb8b55aae1p1@ENST00000412957
1.22e-60FFCP PHASE2:Hg19::chr15:25068824..25068846,+#_664646960b20b55ca710a2459918a4afp5@SNRPN
1.22e-60FFCP PHASE1:Hg19::chr15:25068824..25068846,+#_664646960b20b55ca710a2459918a4afp5@SNRPN
2.53e-60FFCP PHASE1:Hg19::chr8:18541544..18541592,-#_e749522575efe447d6cf7d839003e5d3p2@PSD3
2.53e-60FFCP PHASE2:Hg19::chr8:18541544..18541592,-#_e749522575efe447d6cf7d839003e5d3p2@PSD3
3.0e-60FFCP PHASE2:Hg19::chr18:32398296..32398318,+#_5bb17d81de47abd797257c3f1b3b64d3p7@DTNA
3.0e-60FFCP PHASE1:Hg19::chr18:32398296..32398318,+#_5bb17d81de47abd797257c3f1b3b64d3p7@DTNA
3.01e-60FFCP PHASE1:Hg19::chr5:11384884..11384916,-#_f7e9bd9888f7fa3e855c64cb7bc2edc7p8@CTNND2
3.01e-60FFCP PHASE2:Hg19::chr5:11384884..11384916,-#_f7e9bd9888f7fa3e855c64cb7bc2edc7p8@CTNND2
3.95e-60FFCP PHASE2:Hg19::chr2:50201220..50201261,-#_5f96d78c3ce23713b88b7615b3c7c79bp3@NRXN1
3.95e-60FFCP PHASE1:Hg19::chr2:50201220..50201261,-#_5f96d78c3ce23713b88b7615b3c7c79bp3@NRXN1
1.01e-59FFCP PHASE1:Hg19::chr16:76311254..76311274,+#_17a460dbd5759fcd61cb004d4c4948b1p2@CNTNAP4
1.01e-59FFCP PHASE2:Hg19::chr16:76311254..76311274,+#_17a460dbd5759fcd61cb004d4c4948b1p2@CNTNAP4
4.48e-59FFCP PHASE2:Hg19::chr6:136848260..136848296,-#_05552734038f47cd89996da202291414p4@MAP7
4.48e-59FFCP PHASE1:Hg19::chr6:136848260..136848296,-#_05552734038f47cd89996da202291414p4@MAP7
5.4e-59FFCP PHASE2:Hg19::chr5:11386115..11386130,-#_71175bed4bd6a6c012a5950e9cb9d1d7p2@CTNND2
5.4e-59FFCP PHASE1:Hg19::chr5:11386115..11386130,-#_71175bed4bd6a6c012a5950e9cb9d1d7p2@CTNND2
5.89e-59FFCP PHASE1:Hg19::chr15:46702499..46702523,+#_fbe21497d58aa4a2099f3f1713536763p@chr15:46702499..46702523, +
5.89e-59FFCP PHASE2:Hg19::chr15:46702499..46702523,+#_fbe21497d58aa4a2099f3f1713536763p@chr15:46702499..46702523, +
6.25e-59FFCP PHASE2:Hg19::chr17:36760961..36760976,-#_89b86ba77ad6186e409a422c4e4ab581p2@SRCIN1
6.25e-59FFCP PHASE1:Hg19::chr17:36760961..36760976,-#_89b86ba77ad6186e409a422c4e4ab581p2@SRCIN1
8.07e-59FFCP PHASE2:Hg19::chr19:30016395..30016433,+#_9bd65c4e26cc93f774ab42b9dcb355b8p@chr19:30016395..30016433, +
8.07e-59FFCP PHASE1:Hg19::chr19:30016395..30016433,+#_9bd65c4e26cc93f774ab42b9dcb355b8p@chr19:30016395..30016433, +
8.73e-59FFCP PHASE1:Hg19::chr1:84630610..84630621,+#_136fa857eddf57cd4c7c5811a7c67588p17@PRKACB
8.73e-59FFCP PHASE2:Hg19::chr1:84630610..84630621,+#_136fa857eddf57cd4c7c5811a7c67588p17@PRKACB
9.07e-59FFCP PHASE1:Hg19::chr12:106976678..106976708,+#_383f4e954d85deaca9b09f551b8c2998p2@RFX4
9.07e-59FFCP PHASE2:Hg19::chr12:106976678..106976708,+#_383f4e954d85deaca9b09f551b8c2998p2@RFX4
9.55e-59FFCP PHASE2:Hg19::chr1:45962297..45962320,-#_02753b14f00132ed6870dc51542dfdb0p@chr1:45962297..45962320, -
9.55e-59FFCP PHASE1:Hg19::chr1:45962297..45962320,-#_02753b14f00132ed6870dc51542dfdb0p@chr1:45962297..45962320, -
1.47e-58FFCP PHASE2:Hg19::chr9:87283501..87283520,+#_727c79e2603db7be51fb024143eeade3p17@NTRK2
1.47e-58FFCP PHASE1:Hg19::chr9:87283501..87283520,+#_727c79e2603db7be51fb024143eeade3p17@NTRK2
1.71e-58FFCP PHASE2:Hg19::chr1:2005182..2005194,+#_dbc6f471f7e20dcd3cc5f4cf8d67c900p8@PRKCZ
1.71e-58FFCP PHASE1:Hg19::chr1:2005182..2005194,+#_dbc6f471f7e20dcd3cc5f4cf8d67c900p8@PRKCZ
2.22e-58FFCP PHASE1:Hg19::chr4:46126009..46126045,-#_eeb589efe0a3a218f96ab8613e7a470cp1@GABRG1
2.22e-58FFCP PHASE2:Hg19::chr4:46126009..46126045,-#_eeb589efe0a3a218f96ab8613e7a470cp1@GABRG1
2.29e-58FFCP PHASE2:Hg19::chr20:44036900..44036984,+#_62e62cc0086763e8879eb8313d699f8fp1@DBNDD2
2.29e-58FFCP PHASE1:Hg19::chr20:44036900..44036984,+#_62e62cc0086763e8879eb8313d699f8fp1@DBNDD2
3.08e-58FFCP PHASE2:Hg19::chr17:29624249..29624268,-#_3e66eee96a9d723e9ee477816e31b46dp2@OMG
3.08e-58FFCP PHASE1:Hg19::chr17:29624249..29624268,-#_3e66eee96a9d723e9ee477816e31b46dp2@OMG
3.2e-58FFCP PHASE1:Hg19::chr12:106976656..106976672,+#_0b3e96223d152c49698935a449c224dbp4@RFX4
3.2e-58FFCP PHASE2:Hg19::chr12:106976656..106976672,+#_0b3e96223d152c49698935a449c224dbp4@RFX4
4.55e-58FFCP PHASE2:Hg19::chr1:84630574..84630602,+#_56ddd69eadbb1a8294e82eabd4413667p9@PRKACB
4.55e-58FFCP PHASE1:Hg19::chr1:84630574..84630602,+#_56ddd69eadbb1a8294e82eabd4413667p9@PRKACB
5.83e-58FFCP PHASE1:Hg19::chr16:4850844..4850888,-#_ae7860d2504f4e0470b866d7aa83e2e4p@chr16:4850844..4850888, -
5.83e-58FFCP PHASE2:Hg19::chr16:4850844..4850888,-#_ae7860d2504f4e0470b866d7aa83e2e4p@chr16:4850844..4850888, -
6.55e-58FFCP PHASE2:Hg19::chr6:80131670..80131724,+#_ffb402d194427064b002a7ea24fd052cp@chr6:80131670..80131724, +
6.55e-58FFCP PHASE1:Hg19::chr6:80131670..80131724,+#_ffb402d194427064b002a7ea24fd052cp@chr6:80131670..80131724, +
9.66e-58FFCP PHASE2:Hg19::chr5:160279207..160279247,-#_bd4b8af8b5b40c4dc8c2fe34980325d6p1@ATP10B
9.66e-58FFCP PHASE1:Hg19::chr5:160279207..160279247,-#_bd4b8af8b5b40c4dc8c2fe34980325d6p1@ATP10B
1.16e-57FFCP PHASE2:Hg19::chr4:46126063..46126087,-#_3cbbcdc9685b45ff88c9271f0da1207ep2@GABRG1
1.16e-57FFCP PHASE1:Hg19::chr4:46126063..46126087,-#_3cbbcdc9685b45ff88c9271f0da1207ep2@GABRG1
1.33e-57FFCP PHASE1:Hg19::chr7:47420733..47420758,-#_a633361668a81d8a6de5125b505244ecp@chr7:47420733..47420758, -
1.33e-57FFCP PHASE2:Hg19::chr18:32398400..32398416,+#_a633361668a81d8a6de5125b505244ecp10@DTNA
1.33e-57FFCP PHASE1:Hg19::chr18:32398400..32398416,+#_a633361668a81d8a6de5125b505244ecp10@DTNA
1.33e-57FFCP PHASE2:Hg19::chr7:47420733..47420758,-#_a633361668a81d8a6de5125b505244ecp@chr7:47420733..47420758, -
1.43e-57FFCP PHASE2:Hg19::chr18:32398372..32398394,+#_e369bdf86c3d4c095846de3dd4527611p5@DTNA
1.43e-57FFCP PHASE1:Hg19::chr18:32398372..32398394,+#_e369bdf86c3d4c095846de3dd4527611p5@DTNA
1.44e-57FFCP PHASE2:Hg19::chr11:83984302..83984330,-#_c376b1ce6ddbdbf9178506366397054ep2@DLG2
1.44e-57FFCP PHASE1:Hg19::chr8:48100216..48100246,+#_c376b1ce6ddbdbf9178506366397054ep@chr8:48100216..48100246, +
1.44e-57FFCP PHASE2:Hg19::chr8:48100216..48100246,+#_c376b1ce6ddbdbf9178506366397054ep@chr8:48100216..48100246, +
1.44e-57FFCP PHASE1:Hg19::chr7:29519599..29519612,+#_c376b1ce6ddbdbf9178506366397054ep9@CHN2
1.44e-57FFCP PHASE2:Hg19::chr7:29519599..29519612,+#_c376b1ce6ddbdbf9178506366397054ep9@CHN2
1.44e-57FFCP PHASE1:Hg19::chr11:83984302..83984330,-#_c376b1ce6ddbdbf9178506366397054ep2@DLG2
1.48e-57FFCP PHASE2:Hg19::chr5:112074041..112074101,+#_addba84e5b1f724e4fe93ac9daf81526p4@APC
1.48e-57FFCP PHASE1:Hg19::chr5:112074041..112074101,+#_addba84e5b1f724e4fe93ac9daf81526p4@APC
1.58e-57FFCP PHASE2:Hg19::chr15:30261066..30261096,-#_c80a033ec0e39e13ce4915648729fa12p12@TJP1
1.58e-57FFCP PHASE1:Hg19::chr15:30261066..30261096,-#_c80a033ec0e39e13ce4915648729fa12p12@TJP1
1.62e-57FFCP PHASE2:Hg19::chr10:25940658..25940700,+#_adbcfb140c84afe0df7dc413268f7c30p1@ENST00000450270
1.62e-57FFCP PHASE1:Hg19::chr10:25940658..25940700,+#_adbcfb140c84afe0df7dc413268f7c30p1@ENST00000450270
1.73e-57FFCP PHASE1:Hg19::chr6:69345272..69345284,+#_4050d9f1bfcc4e002b3816a35b02f89ap3@BAI3
1.73e-57FFCP PHASE2:Hg19::chr6:69345272..69345284,+#_4050d9f1bfcc4e002b3816a35b02f89ap3@BAI3
1.82e-57FFCP PHASE2:Hg19::chrX:13835312..13835321,-#_d17afcae2ce7913fa2d972b7ca19bfd2p9@GPM6B
1.82e-57FFCP PHASE1:Hg19::chrX:13835312..13835321,-#_d17afcae2ce7913fa2d972b7ca19bfd2p9@GPM6B
1.87e-57FFCP PHASE1:Hg19::chr17:42989121..42989166,-#_7d7a74b9e2cd02f77119d37887f1d339p7@GFAP
1.87e-57FFCP PHASE2:Hg19::chr17:42989121..42989166,-#_7d7a74b9e2cd02f77119d37887f1d339p7@GFAP
2.07e-57FFCP PHASE1:Hg19::chr17:68101117..68101162,+#_e3cacb8fbe997531656a3191fd8c58e3p2@KCNJ16
2.07e-57FFCP PHASE2:Hg19::chr17:68101117..68101162,+#_e3cacb8fbe997531656a3191fd8c58e3p2@KCNJ16
2.15e-57FFCP PHASE1:Hg19::chr9:112403059..112403079,+#_566632ead85529f4808e6dce5dfc43fap3@PALM2
2.15e-57FFCP PHASE2:Hg19::chr9:112403059..112403079,+#_566632ead85529f4808e6dce5dfc43fap3@PALM2
2.19e-57FFCP PHASE2:Hg19::chrX:13835398..13835429,-#_cdbc4dddb87ee07c7579412b506338d9p6@GPM6B
2.19e-57FFCP PHASE1:Hg19::chrX:13835398..13835429,-#_cdbc4dddb87ee07c7579412b506338d9p6@GPM6B
2.4e-57FFCP PHASE2:Hg19::chr11:62475005..62475041,-#_62aa7d60a187f63424c3022b6e7276d8p6@BSCL2
2.4e-57FFCP PHASE1:Hg19::chr11:62475005..62475041,-#_62aa7d60a187f63424c3022b6e7276d8p6@BSCL2
5.22e-57FFCP PHASE2:Hg19::chr5:87980761..87980821,-#_bd695b8bae555410c69598734adcf8aap4@LINC00461
5.22e-57FFCP PHASE1:Hg19::chr5:87980761..87980821,-#_bd695b8bae555410c69598734adcf8aap4@LINC00461
5.7e-57FFCP PHASE1:Hg19::chr2:74612614..74612643,+#_73c47c27d7d0d4ab681770778965a3acp1@ENST00000418990, p1@ENST00000426715, p1@ENST00000427343
5.7e-57FFCP PHASE2:Hg19::chr2:74612614..74612643,+#_73c47c27d7d0d4ab681770778965a3acp1@ENST00000418990, p1@ENST00000426715, p1@ENST00000427343
1.66e-56FFCP PHASE1:Hg19::chr1:156217805..156217817,-#_7ca208ede6a454c0c52bd38df2c2a065p2@PAQR6
1.66e-56FFCP PHASE2:Hg19::chr1:156217805..156217817,-#_7ca208ede6a454c0c52bd38df2c2a065p2@PAQR6

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