FFCP PHASE1:Hg19::chrX:40005754..40005764,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:40005754..40005764,-
|short_description=p19@BCOR
|description=CAGE_peak_19_at_BCOR_5end
|association_with_transcript=117bp_to_ENST00000412952_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54880 | |EntrezGene=54880 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20893 | |HGNC=20893 | ||
|TSSclassifier=strong | |||
|UniProt=C9JHP3 | |UniProt=C9JHP3 | ||
|association_with_transcript=117bp_to_ENST00000412952_5end | |||
|cluster_id=chrX:40005754..40005764,- | |||
|description=CAGE_peak_19_at_BCOR_5end | |||
|id=chrX:40005754..40005764,- | |||
|ontology_enrichment_celltype=CL:0000148!1.89e-14!10;CL:0000541!1.89e-14!10;CL:0000147!2.31e-12!14;CL:0000710!5.72e-12!20;CL:0000133!2.80e-10!59;CL:0000333!3.57e-09!41;CL:0000075!3.62e-08!27;CL:0000221!1.02e-07!71;CL:0002077!1.48e-07!33;CL:0002322!1.88e-07!5;CL:0000064!2.72e-07!3;CL:0005012!2.72e-07!3;CL:0000067!2.72e-07!3;CL:0002304!2.72e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.97e-33;10!CL:0000147;1.06e-23;14!CL:0002567;6.93e-19;3!CL:0000710;1.30e-16;20!CL:0002566;1.97e-14;1!CL:0002077;5.87e-13;34!CL:0000075;2.63e-12;27!CL:0000039;1.50e-08;7!CL:0000586;1.50e-08;7!CL:0000123;7.27e-08;2!CL:0000242;7.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.36e-33,10;CL:0000541,3.36e-33,10;CL:0000147,9.41e-24,14;CL:0002567,6.63e-19,3;CL:0000710,1.20e-16,20;CL:0002566,1.41e-14,1;CL:0002077,9.08e-14,34;CL:0000075,2.47e-12,27;CL:0000333,7.94e-11,41;CL:0000039,1.65e-08,7;CL:0000586,1.65e-08,7;CL:0000242,8.04e-08,2;CL:0000133,1.56e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.56e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.56e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.27e-11!11;UBERON:0000473!2.21e-09!8;UBERON:0006947!1.96e-07!3;UBERON:0004054!1.96e-07!3;UBERON:0001778!2.72e-07!3;UBERON:0001775!2.72e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.38e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.49e-07,8 | |||
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| ||
|short_description=p19@BCOR | |||
}} | }} |
Latest revision as of 01:10, 25 September 2015
Short description: | p19@BCOR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_BCOR_5end |
Coexpression cluster: | NA |
Association with transcript: | 117bp_to_ENST00000412952_5end |
EntrezGene: | BCOR |
HGNC: | 20893 |
UniProt: | C9JHP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.36e-33 | 10 |
melanoblast | 3.36e-33 | 10 |
pigment cell | 9.41e-24 | 14 |
light melanocyte | 6.63e-19 | 3 |
neurecto-epithelial cell | 1.20e-16 | 20 |
dark melanocyte | 1.41e-14 | 1 |
ecto-epithelial cell | 9.08e-14 | 34 |
columnar/cuboidal epithelial cell | 2.47e-12 | 27 |
migratory neural crest cell | 7.94e-11 | 41 |
germ line cell | 1.65e-08 | 7 |
germ cell | 1.65e-08 | 7 |
Merkel cell | 8.04e-08 | 2 |
neurectodermal cell | 1.56e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 1.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.56e-08 | 2 |